Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1731 ATGATTCTTTGTCAAAGAAAGAACTTGTATCTAATATATGCTTATTCTACTTTTACTTTGAAAGTGAATATTATGCAGTCGGTGGATTCCATCAATAAGCTTCTTCCATTGGAATTACTCCATTTTCACACGCACACCAAAACCAGAACCAGAACCACTCTGGTCAACCTTGAGATGAAGAAGCAAGAACAAGCCATGGCAAGATCCCCATCGCAGTTCTCGTCGGAATGCTGGTTCGACGACGCATGCATTCTCGACATGGACTACTTCGTCAAGACTCTCTCAGGCATCAAAGCCAAAGGCGTGCGTGCAGACCTCATCGGTTCCATCATCACCCACTACGCCTCCAAATGGCTCCCCGACCTCTCCGACGCCAACGACGTCCTCTCCGACAAGTCCACTCTCACCCAGTTCCAAGAGTCCCCAGAAAGCGTCACGGCTTCCTGGATGAAGAAGCGGTTCTGCGTGGAAACCCTCGTCGGCGTTCTGCCTCCGGAGAAGGATTCAATCCCCTGCAACTTCCTGCTTCGTCTTCTCCGGACGGCGAACATGGTGGGGGTTGAGTTGAACTACAAGTCGGAGCTGGAGAAGCGGATATCGTGGCAGCTAGATCAGGCGTCGTTGAAGGAGATAATGATACCGTCGTTCAGTCACACATGTGAGACTCTGCTAGATGTTGAGCTTGTGATAAGGTTGGTGAAGAGGTTTGTGGGGTTGGATAGTGATGGCGCGAAGAGTGGGGTCGCTTTGATGAAGGTAGCGAAGCTGGTTGATGCGTACCTTGCTGAAGCTGCAGTGGACGCCAATCTGGGCTTGTCTGAGTTCGTTGTTCTTGCAGGAGCTCTTCCTCCACATTCAAGAGCTACAGATGATGGCTTGTACAGAGCCATTGACACCTATCTTAAAGCACATCCAGGGGTATTGAAGCAAGAAAGGAAAGGTCTGTGTAGGCTAATAGATTGCCGGAAACTGACCCCAGAAGCCTCACTTCATGCAGCACAGAACGAACGCTTGCCTGTAAGAGCAGTGATTCAAGTGCTCTTCTCGGAGCAGACGAAGCTGAATCGTCACATAGATTGGAGTGGGTCGTTGGGAGGCACGAGAAGCCCCAATGGAGGGTTCGATTTGCCAGCTCGGTCTTTCTCAAAGCGCGAGATGTACGCACAGCAGATGGAGATAAGGAAGCTGAAGGAAGACGTTTGCAGGCTTCAGAGCCAGTGCAATGCCATGCAGTTGCAGATGGAGAGGATGATGATGGAGAAGAACAAGAAGGGGTTCTTCAAATGGAGGAAGTTTGGGATGCATGCGTTCAGTAAAAGTGCGACTTCTTCTTCGGTGGAGAAAATTGATGAAGGGATCGAAGGGGAGGCTGGGTTTGGAAGACAAACTCCTATAGACAACATGAAAACCAGGATGGTCAAACCTCGGACTCCTCACAAGTGGAGGAAGTCCATGTCCTGA 1461 0.4997 MILCQRKNLYLIYAYSTFTLKVNIMQSVDSINKLLPLELLHFHTHTKTRTRTTLVNLEMKKQEQAMARSPSQFSSECWFDDACILDMDYFVKTLSGIKAKGVRADLIGSIITHYASKWLPDLSDANDVLSDKSTLTQFQESPESVTASWMKKRFCVETLVGVLPPEKDSIPCNFLLRLLRTANMVGVELNYKSELEKRISWQLDQASLKEIMIPSFSHTCETLLDVELVIRLVKRFVGLDSDGAKSGVALMKVAKLVDAYLAEAAVDANLGLSEFVVLAGALPPHSRATDDGLYRAIDTYLKAHPGVLKQERKGLCRLIDCRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRHIDWSGSLGGTRSPNGGFDLPARSFSKREMYAQQMEIRKLKEDVCRLQSQCNAMQLQMERMMMEKNKKGFFKWRKFGMHAFSKSATSSSVEKIDEGIEGEAGFGRQTPIDNMKTRMVKPRTPHKWRKSMS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1731 486 PANTHER OS12G0117600 PROTEIN 64 438 IPR043454 -
Dere11g1731 486 Pfam NPH3 family 77 329 IPR027356 -
Dere11g1731 486 ProSiteProfiles NPH3 domain profile. 76 353 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1731 Dere-ChrDere11 31093936 31099606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1731 75 354 EF-hand Containing Proteins AT3G44820 37.086 5.49e-52 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g1629 12 28777414 28779788 Dere11g1731 11 31093936 31099606 CCT
Dere11g1731 11 31093936 31099606 Dere11g1731 11 31093936 31099606 ECH