Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1558 ATGGATTTCTTCAAGTGGGTCAACTTGATCCTAATGTTTTATCTCTTTGCCGCAACACCCATCTTCTCAGATTCCTCCTTGAGCTCAGACCAGCTATTGTCATCAGTTCCCTCCGACTTTTTAAAATTTGCCAAGAAGCCGGAGGTTCTTGATTGGATGATCGAAATTAGAAGGAAGATTCATGAGAACCCTGAACTGGGTTATGAGGAATTTGACACCAGTGAGCTGATAAGAGCAAAATTGGATAAATTGGGTATTCCTTATAAATACCCAGTTGCAGTTACCGGCGTTATTGGCTTCATAGGTACCGGACGGCCTCCTTTTGTTGCAATAAGAGCTGATATGGATGCTCTTGCTATGCAGGAAATGGTGGAGTGGGAGCACAAAAGTAAAGTACCAGGAAAAATGCATGCTTGTGGACATGATGCTCATGTTGCTATGCTCCTCGGTGCTGTAAAGATCCTCAAACAGCACGAAAAAGAGATAAAAGGAACCGTTGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGGTCGAGGGGCCAAAAAAGTTTTAGATGCTGGTCCTTTAGAAAATGTCAGTGCTATCTTTGGATTGCATGTCTCACCTATGTTATCCATCGGTGAAGTGGCCTCTAGGTCTGGTCCCTTCTTGGCAGGAAGTGGCTTCTTTGAAGCAGTTATTAGTGGAAAGGGAGGTCATGCAGCTATTCCCCAACATACAATAGATCCAATTTTGGCAGCTTCTAATGTAATTGTTAGTTTACAACATCTTGTTTCTCGTGAGGCTGATCCTCTGGACTCCCAGGTTCTAACGGTAGCAAAATTTCAAGGTGGCGGTGCATTCAATGTTATACCTGATTCAGTCACAATTGGTGGGACCTTCCGAGCTTTTTCAAAAGAAAGCTTCATGCAACTAAAACAGCGGATTGAGCAGGTTATCACTGGGCAAGCTGCTGTGCAGAGGTGCAATGCAACGGTTAGCTTTCTTGATAAAGAGAAACCCTTCTTCCCTCCAACTGTTAACGATGGTGACTTGCACAATCATTTTCGACAAGTAGCTGGAGGTTTGCTGGGCATCAATAAAGTTAAAGAAATGCAGCCGTTGATGGGATCTGAGGACTTTGCATTCTATCAAGAGAAAATACCTGGTTACTTCTTCCTACTTGGAATGGAGGATACTTCAATTGAACAGCTTGATTCAGTACACTCACCCTATTTCAAAATCAATGAAGATGTACTTCCTTATGGAGCTGCACTTCATGCATCATTAGCAGCAAGTTATCTTCTCAAGTTTCAGCAGAATGTGCCAGTGGCAGAAGGTAAATATCATGATGAATTATGA 1341 0.428 MDFFKWVNLILMFYLFAATPIFSDSSLSSDQLLSSVPSDFLKFAKKPEVLDWMIEIRRKIHENPELGYEEFDTSELIRAKLDKLGIPYKYPVAVTGVIGFIGTGRPPFVAIRADMDALAMQEMVEWEHKSKVPGKMHACGHDAHVAMLLGAVKILKQHEKEIKGTVVLVFQPAEEGGRGAKKVLDAGPLENVSAIFGLHVSPMLSIGEVASRSGPFLAGSGFFEAVISGKGGHAAIPQHTIDPILAASNVIVSLQHLVSREADPLDSQVLTVAKFQGGGAFNVIPDSVTIGGTFRAFSKESFMQLKQRIEQVITGQAAVQRCNATVSFLDKEKPFFPPTVNDGDLHNHFRQVAGGLLGINKVKEMQPLMGSEDFAFYQEKIPGYFFLLGMEDTSIEQLDSVHSPYFKINEDVLPYGAALHASLAASYLLKFQQNVPVAEGKYHDEL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1558 446 SUPERFAMILY Bacterial exopeptidase dimerisation domain 218 337 IPR036264 -
Dere11g1558 446 SUPERFAMILY Zn-dependent exopeptidases 48 429 - -
Dere11g1558 446 Gene3D - 218 336 - -
Dere11g1558 446 PIRSF Amidohydrol_AmhX 40 432 IPR017439 GO:0016787
Dere11g1558 446 Pfam Peptidase dimerisation domain 219 315 IPR011650 -
Dere11g1558 446 NCBIfam amidohydrolase 53 415 IPR017439 GO:0016787
Dere11g1558 446 Pfam Peptidase family M20/M25/M40 110 424 IPR002933 GO:0016787
Dere11g1558 446 PANTHER PEPTIDASE M20 FAMILY MEMBER 31 435 IPR017439 GO:0016787
Dere11g1558 446 CDD M20_IAA_Hyd 53 416 IPR044757 GO:0009850|GO:0016787
Dere11g1558 446 FunFam N-acetyldiaminopimelate deacetylase 218 336 - -
Dere11g1558 446 Gene3D Zn peptidases 53 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1558 Dere-ChrDere11 28452143 28456562 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g1470 12 26915380 26919799 Dere11g1558 11 28452143 28456562 CCT