Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0186 ATGCTAAACCAATCCACTATGAGAGAGGAAAGACTCGTCGTTACGACGCTAAACATTCCAAGCCTCAAAACCTCTTCAAACGTCGTCGTTGAGCCCCACAACCATGAACCTCTGTGGAAGAAGACCACCCTCAGTTTCGCCGCCGGTGGTGGTGCCGGAAGTTCCGGTGGCGGGGGTGGTTGCAAATTCGCCTGTGTTTCGGTGGCAGAGAGGAAAATTGATAAAGAATTCATGCCAACGCCGGCTCAGCTCCTGAAGCATCCACTGGCCGTCGTCGCATTCGTGCCCAAAGATGCCGCCCTGTTCCTCGCCGGAGCCATCGCCGGCGCCGCGGCCAAGACTGTCACGGCTCCGCTGGATCGTATCAAGATCCTTATGCAGACTCATGGCGTACGAGTCGGGCAAGAAAGTGCTAAGAAGGCAATTGGTTTCATTGAGGCTATAACAGTTATAGGGAAGGAAGAAGGCATCAAAGGTTACTGGAAGGGCAACCTCCCCCAGGTGATTCGTATCATACCTTATAGCGCTGTCCAGCTTTTTGCTTATGAAACCTATAAGAAAATATTCAGGGCAAAGAATGGTGAGCTCTCTGCCTTTGGAAGACTTGCAGCTGGTGCTTTTGCTGGCATGACGTCCACTTTTATTACTTATCCATTAGACGTCCTGAGATTACGATTGGCAGTTGAACCAGGTTACCGAACCATGACAGAGGTTGCCTTGGGCATGTTAAGAAACGAAGGATTTGCTTCATTCTACTATGGGTTGGGGCCTTCTCTAATTGGAATAGCTCCGTATATTGCAGTGAACTTCTGTGTTTTTGACTTATTAAAGAAGTCTTTACCTGAGAAATATCAAAAGAGAACTGAAACGTCCGTACTAACAGCTGTGCTCTCGGCTTCTCTTGCCACGCTCACATGCTACCCCCTAGACACTGTGCGAAGACAGATGCAAATTAAGGGTACACCTTACAAGACAGTTTTCGATGCCCTTACAGGCATTGTGGCACGAGATGGAGCTATTGGCTTGTACCGGGGATTTGTGCCGAATGCCTTGAAAAACCTACCAAACAGCAGCATCAGGCTTACCACATATGACCTTGTTAAACGCCTAATTGCAGCTAGTGAGACAGAGTTCCAAACAATTTCAGAGGAAAATCGCAAGAAACAAACAAACACTAAGAGTCAATGA 1188 0.4815 MLNQSTMREERLVVTTLNIPSLKTSSNVVVEPHNHEPLWKKTTLSFAAGGGAGSSGGGGGCKFACVSVAERKIDKEFMPTPAQLLKHPLAVVAFVPKDAALFLAGAIAGAAAKTVTAPLDRIKILMQTHGVRVGQESAKKAIGFIEAITVIGKEEGIKGYWKGNLPQVIRIIPYSAVQLFAYETYKKIFRAKNGELSAFGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMTEVALGMLRNEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSVLTAVLSASLATLTCYPLDTVRRQMQIKGTPYKTVFDALTGIVARDGAIGLYRGFVPNALKNLPNSSIRLTTYDLVKRLIAASETEFQTISEENRKKQTNTKSQ 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0186 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 196 279 IPR018108 -
Dere11g0186 395 Pfam Mitochondrial carrier protein 195 282 IPR018108 -
Dere11g0186 395 Pfam Mitochondrial carrier protein 291 372 IPR018108 -
Dere11g0186 395 Pfam Mitochondrial carrier protein 101 192 IPR018108 -
Dere11g0186 395 FunFam Envelope ADP,ATP carrier protein 98 376 - -
Dere11g0186 395 Gene3D Mitochondrial carrier domain 97 375 IPR023395 -
Dere11g0186 395 PRINTS Mitochondrial carrier protein signature 211 229 IPR002067 GO:0055085
Dere11g0186 395 PRINTS Mitochondrial carrier protein signature 163 183 IPR002067 GO:0055085
Dere11g0186 395 PRINTS Mitochondrial carrier protein signature 295 317 IPR002067 GO:0055085
Dere11g0186 395 PRINTS Mitochondrial carrier protein signature 101 114 IPR002067 GO:0055085
Dere11g0186 395 PRINTS Mitochondrial carrier protein signature 114 128 IPR002067 GO:0055085
Dere11g0186 395 PRINTS Mitochondrial carrier protein signature 252 270 IPR002067 GO:0055085
Dere11g0186 395 PANTHER SOLUTE CARRIER FAMILY 25 88 371 - -
Dere11g0186 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 286 370 IPR018108 -
Dere11g0186 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 96 188 IPR018108 -
Dere11g0186 395 SUPERFAMILY Mitochondrial carrier 99 366 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0186 Dere-ChrDere11 3072197 3076909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0186 7 389 Organic Solute Cotransporters AT3G51870 67.188 0.0 516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g0186 11 3072197 3076909 Dere12g0187 12 3298331 3303767 CCT