Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0099 ATGGATTCCTCTTCATCTCCCTTGTCCTTTCAAAACCATCCAGAAGCTTCCCCAAAACCTTACAAGAAAAGCTTCGTCACAACTTTAATGGAGGCAGCGACCCTTCGGACTCCTTCATTCAAAGAAGACACCTACTTCATTTCGCACTTGAAATCTTCTGAGAAGAAAGCCCTTCAGGAGCTCAAAGACAAGCTCAAAGCCTCTGATTCCTCTGAATCTTCCATGTGGGGTGTTTCGCTTCTCGGGGGTGACGAAAAAGCTGACGTTATTCTCTTGAAATTTCTAAGAGCCAGAGATTTCAGAGTCGGAGATGCTCTAAACATGCTCCTGAAATGCTTGGCTTGGAGGAAGGAGTTTGGAGCTGACGACGTCGTTGAAGAGGACTTGGGGTTCAAAGAGCTTGAAGGGGTTATAGCCTATATGCACGGGTATGACAGAGAAGGGCACCCTGTGTGCTACAATGCTTACGGGATTTTCAAAGATAAAGAAATGTACGAAAGAATATTTGGGAATGAAGAGAAGCTTAAGAAATTTCTGAGATGGAGAGTTCAAGTTTTGGAAAAAGGCATTAAGCTTCTTCATTTCAAGCCTGGTGGGGTTAATTCTATTATTCAAGTCACTGATCTTAAAGACATGCCTAAGAGAGAGCTTAGGGTGGCTTCTAATCAGATCCTCTCTCTGTTCCAAGACAATTACCCAGAAATGGTCGCTCGTAAGATTTTCATCAATGTCCCTTGGTACTTCAGCATGTTGTATTCAATGTTCAGTCCTTTTCTGACTCAACGAACTAAGAGCAAGTTTGTGATCTCCAAGGAAGGAAATGCTGCGGAGACACTCTACAAATTTATAAGGCCTGAGGACATTCCAGTTCAGTATGGAGGACTGAGTCGTCCCATTGATTTGCAGAATGGTCCCCCAAAACCTGCTTCTGAGTTCACTGTAAAAGGAGGAGAGAAAGTGAACATACAAGTAGAAGGCATTGAGGCTGGAGCAACAATCACATGGGACATTGTAGTGGGAGGTTGGGACTTGGAGTACAGTGCAGAGTTTGTGCCAAGTGCAGAAGGAAGCTACACCATAGCAGTTGAGAAAGCAAGGAAGATGGCAGCATCAGATGAAGCAATACACAACTCATTCACTTCAAGAGAAGCAGGGAAGATGGTACTGTCTGTGGATAACACATGCTCTCGCAGGAAAAAAGTTGCTGCATATCGCTATATTGTCCGCAAATGCAGCAGCAGCAGCACCACCATCTGA 1257 0.4431 MDSSSSPLSFQNHPEASPKPYKKSFVTTLMEAATLRTPSFKEDTYFISHLKSSEKKALQELKDKLKASDSSESSMWGVSLLGGDEKADVILLKFLRARDFRVGDALNMLLKCLAWRKEFGADDVVEEDLGFKELEGVIAYMHGYDREGHPVCYNAYGIFKDKEMYERIFGNEEKLKKFLRWRVQVLEKGIKLLHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNAAETLYKFIRPEDIPVQYGGLSRPIDLQNGPPKPASEFTVKGGEKVNIQVEGIEAGATITWDIVVGGWDLEYSAEFVPSAEGSYTIAVEKARKMAASDEAIHNSFTSREAGKMVLSVDNTCSRRKKVAAYRYIVRKCSSSSTTI 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0099 418 SUPERFAMILY CRAL/TRIO N-terminal domain 40 128 IPR036273 -
Dere11g0099 418 MobiDBLite consensus disorder prediction 1 20 - -
Dere11g0099 418 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 126 300 IPR001251 -
Dere11g0099 418 Gene3D - 126 305 IPR036865 -
Dere11g0099 418 Pfam CRAL/TRIO domain 135 294 IPR001251 -
Dere11g0099 418 FunFam SEC14 cytosolic factor family protein 46 118 - -
Dere11g0099 418 Gene3D GOLD domain 306 408 - -
Dere11g0099 418 CDD SEC14 131 295 IPR001251 -
Dere11g0099 418 Gene3D - 46 118 - -
Dere11g0099 418 ProSiteProfiles GOLD domain profile. 276 410 IPR009038 -
Dere11g0099 418 SUPERFAMILY CRAL/TRIO domain 132 297 IPR036865 -
Dere11g0099 418 SMART CRAL_TRIO_N_2 87 112 IPR011074 -
Dere11g0099 418 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 311 409 IPR036598 -
Dere11g0099 418 PANTHER PATELLIN-1 20 410 IPR044834 GO:0008289
Dere11g0099 418 FunFam SEC14 cytosolic factor family protein 135 310 - -
Dere11g0099 418 Pfam CRAL/TRIO, N-terminal domain 57 110 IPR011074 -
Dere11g0099 418 SMART sec14_4 133 297 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0099 Dere-ChrDere11 1576441 1579105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g0099 91 289 Acyl Lipid Metabolism Gene Families AT1G55840 28.019 1.48e-12 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0113 12 1411368 1413577 Dere11g0099 11 1576441 1579105 CCT