Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g0998 ATGGCTGTTAACACTATTCTAACTTCTCACCTCCAATACAAAGCTGAAAGCTTGGAATCAGCTCTCTCTACCAGCAACTTCAGTTTTCAACATCTTCTGCAAATGGCAGGCAAATTCATTGGTGTTGAACCTTTGTCATTTATCTTCCTCTTATCCCTCTCACTTTGTCAACTTTCAGAGGCATGTCACGCTGTGGACAAAGAAGCATTACTTGATTTTAAGAGCAAGATCAGCTCTGACCCTTCCAATCTCTTGCTTTCTTGGACATCTTCCTCTGACTGCTGCTATGACTGGGAAGGCATCACGTGTGATTCCACAGGCAGGGTCATCAACCTCACTCGTACAGGCATTGTAGAAGAGGATGGATTCCTCTTAGAAACACACATGTCTGGAACCTTATCACCTTTTCTTGGAAACTTATCTAGTCTTCAAGTTCTGGACCTTAGCAATCTTAAGCAGTTAAAGGGTCCAATACCACCAGAATTTGGCAAGTTACCTGCCCTCACTCGCCTTTTTCTTTATTCCAACATGCTTACAGGTGTTATGCCAGCAGCTTTCAGATGCCTTTCCCAGCTAGAGATGTTATACCTTCGCAACAATAACTTGTCTGGTAATGTTCCTTCGTCTGTTTTTAAATCTTTAAGGATGCTTTCAGAGTTGGATCTGTCTGGGAACAACTTGTCTGGTAGGATTCCATCTTCAATTGGGAAATTGTCAATGCTTGCTTGGCTTGATCTTCATGATAACAATTTCCTTGGTAGGATTCCTGCAAGTATTGGCAATCTCAAGAATCTCAAATATTTGGATATTTCGGGTAATCAACTGAGTGGAAGAATTCCAAATTCGATAGGCAGTCTCTCTCAATTGTTTGCTCTCTATCTGAACAATAACCAAATTGCTAAAAGAATCCCATCTTCGATAGGAAGCCTAACCTCTCTAACATTCTGCAGTATATCAGAGAACAAGCTCGCAGGCAATATACCCCCATCCATTGGGAAGCTCACTAACTTGAAAAGGCTAATTCTGGAGAACAACCAACTTACTGGGAAATTGCCTGCTACCATTGGCCACTTGACCAATCTAACTGAGTTGTTTCTCGCAAACAATCGTTTCACAGGAAAAATACCACCTTCTTTGGGCAATTTACTTAGCCTTCAGACCCTAGATTTGTCAAGAAACCAACTTTCTGGTGAACTTCCCCATCAACTCTCTAAACTAAAGGGGTTACAAAGCTTTGACCTGTCCTTCAATCCACTGGGACTAGCCACAATACCAAAATGGGTTTCAAAATTGAAACTTTTTAGATTACTATTGGCCAAAACGGGGATTCGAGGAACACTACCCGACTGGTTAGCATCATCATCCATAGGGCTACTAGATGTGTCAAGCAATGCATTGACAGGGAAATTGCCTAGTTGGATCGGAAACATGACTATGCTTTCGTTCCTGAACTTGTCAAATAACCAATTCCATTCATCAATTCCAGTTGAGTTTAAGAGCCTTCGGTATCTGATGGACCTTGATCTGCATTCCAACAAGTTCAGTGGCACTCTGAAAGTGATATATGACAAACAAGTAGAATTTGCACTTGGGAATTACAATTCCATTGACTTATCTAATAACATGTTCACTGGTCCCATTGATGAGGACATTGGGGAGAAACCCTCGATGGTTGCAATCAAATCCCTTAATTTATCGCACAACCAGTTAGGAGGATCGATTCCGAAATCAATTGGAAAATTGAGAGAATTGCAGATTCTGGAGCTAGAGGGGAGTGGGATTTCAGGGAAGATTCCAGAGGAGCTTGGAAATGCCGAGAGATTAGCAACCATTCGGCTTTCGAACAACCGGTTAAGCGGGAATATACCAGAAAAGGTTCTAAATTTGAAGAGGCTGCGAGATTTCGATGTGTCAAGGAACCAACTTAGCGGCAGGATTCCTATGCACAAAACCATCATACCCAAATCTGCATTTTTGGGTAATCCTGGATTGTGTGGACTACCACTTCCTTCTTGTAAGCATTCTTAA 2028 0.4177 MAVNTILTSHLQYKAESLESALSTSNFSFQHLLQMAGKFIGVEPLSFIFLLSLSLCQLSEACHAVDKEALLDFKSKISSDPSNLLLSWTSSSDCCYDWEGITCDSTGRVINLTRTGIVEEDGFLLETHMSGTLSPFLGNLSSLQVLDLSNLKQLKGPIPPEFGKLPALTRLFLYSNMLTGVMPAAFRCLSQLEMLYLRNNNLSGNVPSSVFKSLRMLSELDLSGNNLSGRIPSSIGKLSMLAWLDLHDNNFLGRIPASIGNLKNLKYLDISGNQLSGRIPNSIGSLSQLFALYLNNNQIAKRIPSSIGSLTSLTFCSISENKLAGNIPPSIGKLTNLKRLILENNQLTGKLPATIGHLTNLTELFLANNRFTGKIPPSLGNLLSLQTLDLSRNQLSGELPHQLSKLKGLQSFDLSFNPLGLATIPKWVSKLKLFRLLLAKTGIRGTLPDWLASSSIGLLDVSSNALTGKLPSWIGNMTMLSFLNLSNNQFHSSIPVEFKSLRYLMDLDLHSNKFSGTLKVIYDKQVEFALGNYNSIDLSNNMFTGPIDEDIGEKPSMVAIKSLNLSHNQLGGSIPKSIGKLRELQILELEGSGISGKIPEELGNAERLATIRLSNNRLSGNIPEKVLNLKRLRDFDVSRNQLSGRIPMHKTIIPKSAFLGNPGLCGLPLPSCKHS 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g0998 675 SUPERFAMILY L domain-like 434 672 - -
Dere09g0998 675 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 301 399 - -
Dere09g0998 675 Pfam Leucine rich repeat 249 299 IPR001611 GO:0005515
Dere09g0998 675 Pfam Leucine rich repeat 142 202 IPR001611 GO:0005515
Dere09g0998 675 Pfam Leucine rich repeat 359 419 IPR001611 GO:0005515
Dere09g0998 675 SMART LRR_sd22_2 358 384 - -
Dere09g0998 675 SMART LRR_sd22_2 406 423 - -
Dere09g0998 675 SMART LRR_sd22_2 262 288 - -
Dere09g0998 675 SMART LRR_sd22_2 629 657 - -
Dere09g0998 675 SMART LRR_sd22_2 189 219 - -
Dere09g0998 675 PRINTS Leucine-rich repeat signature 382 395 - -
Dere09g0998 675 PRINTS Leucine-rich repeat signature 217 230 - -
Dere09g0998 675 Gene3D Ribonuclease Inhibitor 422 675 IPR032675 -
Dere09g0998 675 ProSiteProfiles Leucine-rich repeat profile. 384 407 IPR001611 GO:0005515
Dere09g0998 675 Gene3D Ribonuclease Inhibitor 327 421 IPR032675 -
Dere09g0998 675 Gene3D Ribonuclease Inhibitor 233 326 IPR032675 -
Dere09g0998 675 Gene3D Ribonuclease Inhibitor 63 232 IPR032675 -
Dere09g0998 675 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 213 432 - -
Dere09g0998 675 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 123 291 - -
Dere09g0998 675 Pfam Leucine rich repeat N-terminal domain 66 104 IPR013210 -
Dere09g0998 675 ProSiteProfiles Leucine-rich repeat profile. 264 286 IPR001611 GO:0005515
Dere09g0998 675 SMART LRR_typ_2 165 188 IPR003591 -
Dere09g0998 675 SMART LRR_typ_2 189 213 IPR003591 -
Dere09g0998 675 SMART LRR_typ_2 382 406 IPR003591 -
Dere09g0998 675 SMART LRR_typ_2 286 310 IPR003591 -
Dere09g0998 675 SMART LRR_typ_2 358 381 IPR003591 -
Dere09g0998 675 SMART LRR_typ_2 262 285 IPR003591 -
Dere09g0998 675 SMART LRR_typ_2 629 660 IPR003591 -
Dere09g0998 675 SMART LRR_typ_2 477 500 IPR003591 -
Dere09g0998 675 SMART LRR_typ_2 214 238 IPR003591 -
Dere09g0998 675 SMART LRR_typ_2 557 581 IPR003591 -
Dere09g0998 675 SMART LRR_typ_2 334 357 IPR003591 -
Dere09g0998 675 SUPERFAMILY L domain-like 72 419 - -
Dere09g0998 675 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 400 675 - -
Dere09g0998 675 Pfam Leucine Rich Repeat 217 238 IPR001611 GO:0005515
Dere09g0998 675 Pfam Leucine Rich Repeat 561 581 IPR001611 GO:0005515
Dere09g0998 675 Pfam Leucine Rich Repeat 336 358 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g0998 Dere-ChrDere09 12897609 12899636 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g0998 124 672 Receptor kinase-like Gene Family AT5G46330 34.768 2.41e-76 264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g0998 09 12897609 12899636 Dere13g0701 13 8826401 8827669 CCT
Dere09g0998 09 12897609 12899636 Dere09g0998 09 12897609 12899636 ECH
Dere13g0701 13 8826401 8827669 Dere09g0998 09 12897609 12899636 ECH