Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1187 ATGGGAGACGCGTTGTATTCTTCTAACTCAAGCAAGAACTCTAAGTCTAGCAATCTCGTCACTGGGAAAAAAGCATATAATAAATCGTTGGTTGCATCTCGTCCTAAAGGTTTTGTGCAGAAAAATTATGACCAGCTTGTTTCGCTGACCCATGGTGGCTTTGGAAGTAGTACTGTGGGTCATTTGACCTTTTTCTTACTTAAAGTTGCTGCATTAGAAACTGTGAGGAGGTTCTCAAAAAACAGGTGTCCAGTTATATGGAGAGGTCTTCAGGCTCTACAACTCCTTTGCTATCCACCATTTAAGTGGATTCAGAGGTGGGCACCCTTCAAGGGTTTGGTCAAAAGCATGCAGATCCTGTCAAGACCATTACTAGTTCTTTCAATTGCAACAGCTTTTAATGATGAATCAGAATATAGTGATGGAACGTCAGATTGTAATACTGATTCCCCTGATTCAGAAATATACTCAGAGTCATCTCCAGTGCAGACTAATAGAAATACAAGTCACTGCAACACAGCACCTGAAGTTTTAGAACCTGAAAATTGGTTGATTCAACTCTACAAAGAGCTGGAAAATCAAGGGATTAGTTTGCCAGAAAGAATCCATGAGGATGAGCTCCGGAGGTTTTATACAGCTTCTAATAATGATTTTTCAAGCTTCCTTACTTCAATTAAGAAGACAATCCGCTGGAGAGAAACTTACAGAATTCTTTCAGGAGAAGAGCTGGAAATGTGGTCGAATTTGGTGTTTTGGCATGGCTCTGATGTGATGCACAGACCTTGCCTCATTGTGAGGCTTGGGATAGCTTGCAGCACATTGGTGTCTCAAGATAGACCTAGATTTGCTCAGGCAGTCATATCACAGGTAGAATATGGAGTCCTACACTTGGTTGAGGCAGACAATCCTCAAATTACAGTGTTGGTGGACTGTGAAGGGTTATCTCCATTGAGGATTCCCTTGCAGATGATGAAATCATGTTCTTCCCTTCTGCAAGATCACTTTCCTAATCTTCTTGGTTGTTTGCTTGTCATTCGACTTCCAGCAGTTGTTCGTGTTATGGCCCAGACTTTTATTCAGGTTTTGAAGCCAGTTACTAGGAAAAAGTTGAAGATAGAAGGAGAGTTGTATCAGAAGGTTATTTATGACTATCTACCGTTGCTACCATCATATCTTGGAGGCAGCTGCACTTGCATGAAATGTTCGAAAATTAGCAGGGGGGATATGCAGCGACATTATGCGACTGGGACCAGCAGCGGGATAGATAACTGGGCTGAGGCTGATGTCAGTGACAATGAGGATTCTCCATCACTGCATCCATCCCGTGATTTAGATGGCCACCTACATGGTAATTATGACCAGTTTTTAAGAACTGCTATCATAAGCGTTCTTCTATTCTGGGTTTTCGTAGCTTTTAGTGTTGGACTATATGATCCTGGTAGTCTTCATTTACCCTCATGA 1461 0.4182 MGDALYSSNSSKNSKSSNLVTGKKAYNKSLVASRPKGFVQKNYDQLVSLTHGGFGSSTVGHLTFFLLKVAALETVRRFSKNRCPVIWRGLQALQLLCYPPFKWIQRWAPFKGLVKSMQILSRPLLVLSIATAFNDESEYSDGTSDCNTDSPDSEIYSESSPVQTNRNTSHCNTAPEVLEPENWLIQLYKELENQGISLPERIHEDELRRFYTASNNDFSSFLTSIKKTIRWRETYRILSGEELEMWSNLVFWHGSDVMHRPCLIVRLGIACSTLVSQDRPRFAQAVISQVEYGVLHLVEADNPQITVLVDCEGLSPLRIPLQMMKSCSSLLQDHFPNLLGCLLVIRLPAVVRVMAQTFIQVLKPVTRKKLKIEGELYQKVIYDYLPLLPSYLGGSCTCMKCSKISRGDMQRHYATGTSSGIDNWAEADVSDNEDSPSLHPSRDLDGHLHGNYDQFLRTAIISVLLFWVFVAFSVGLYDPGSLHLPS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1187 486 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 7 480 - -
Dere08g1187 486 MobiDBLite consensus disorder prediction 137 170 - -
Dere08g1187 486 SUPERFAMILY CRAL/TRIO domain 246 399 IPR036865 -
Dere08g1187 486 Pfam CRAL/TRIO domain 249 394 IPR001251 -
Dere08g1187 486 Gene3D - 179 422 IPR036865 -
Dere08g1187 486 CDD SEC14 241 394 IPR001251 -
Dere08g1187 486 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 252 400 IPR001251 -
Dere08g1187 486 SMART sec14_4 244 397 IPR001251 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1187 08 16048772 16052966 Dere07g0952 07 13078073 13082573 CCT
Dere08g1187 08 16048772 16052966 Dere08g1187 08 16048772 16052966 ECH