Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1084 ATGCATCTTGATGACCAAAACGACATCGTCTACCTGACTCAAAATATTGGGCTTTTGAAGATTCTGGACTCTCTGGAAAATAAGACCAATTTAGACAGACACAGATCTCCCTCTTCCGCTTCTCCGGCGATCTTAAACCCTTCGAGAATGCTTACTCGACGGCACATCGTTGTCGTTTCGCTCACTACACTTCTCCTTATCTCATTGTTCTCTCTCTCTGCATGCAAGACCGTCGAAAATGACGACGACGAAGATCTCAGCTTTCTCGAAGAAGCTGATGACAGCTCCTCTTCACACAACCACCACCCAGATCCAGGCCATTCAGACGACGATGACTTCGCCTACGACGATGATTTCGGGGACTTCTCCGGCTATGGCGAGTCAGAGGCCAATGGAGAGGCTTACAAGCTACCAGAAGTGGATGATAAGGACGTCGTCGTTTTGAAGGAGAGGAACTTCAGTGACGTTGTGGAGAATAACCGGTTTGTAATGGTGGAATTCTACGCTCCCTGGTGTGGTCACTGCCAGGCTTTGGCGCCAGAGTACGCTGCGGCGGCGACCGAGTTGAAGTCTGAGAATGTGGTCTTGGCGAAGGTGGATGCCACGGAGGAGAATGAATTAGCACATGAGTACGATGTTCAGGGATTCCCTACTGTCTACTTTTTTATCGATGGGGTTCACAAACCTTATACTGGTCAGAGGACCAAAGATGCCATAGTGACCTGGATTAAGAAGAAGATAGGACCTGGTATATACAATATAACGACATTGGATGACGCTGAGCGCATATTGAGCTCTGAAAGCAAAGTTATTTTGGGCTTCCTCAACTCATTGGTTGGTCCTGAGAGTGAGGAGCTAGCTGCTGCTTCAAGACTTGAGGATGATGTAAATTTTTATCAAACCGTGAACCCTGAAGTGGCAAAGCTTTTCCATATAAAGCCAAATGTTAAACGCCCTGCTTTGGTCCTAATCAAGAAAGAGGAGGAGAAGTTGAACTATTTTGCTGGTGAATTTGTGAAATCTAAAATAGCAGACTTTGTATCATCCAACAAGCTTCCTTTAGTAATAACTTTTACAAGAGAAAATGCCCCCTCAATTTTTGAAAGTTCAATAAAGAAACAGCTGTTGCTGTTCGCAACTTCAAATGATTCAGAGAAGTTCATCCCAGTTTTCCAAGAAGCAGCAAAGTTTTTCAAGGGAAAGCTGATCTTTGTATATGTGGAAGTGGATAATGAAGATGTTGGAAAGCCTGTTGCAGATTATTTTGGTGTCACTGGCAATGCTCCCAAAGTACTTGGATACACAGCAAATGATGACGGAAAGAAATTTGTGTTTGATGGAGAGTTGACCACTGACAAAATTAAGGTATTTGGGGAAGATTTCCTTGAAGACAAGCTAAAACCATTTTATAAGTCAGATCCTGTTCCTGAAAGTAATGATGGTGATGTCAAAATAGTTGTTGGGGATAATTTTGATGAAATTGTCTTGGATGAGTCAAAGGATGTCCTCCTTGAGATTTATGCACCCTGGTGTGGTCATTGCCAAGCACTGGAACCAATATACGACAAACTTGCAAAACATTTGCGTGGCATTGAGTCTCTTGTAATAGCAAAGATGGATGGAACAACAAATGAGCACCCCAGGGCAAAGGCCGATGGATTCCCAACTCTTCTGTTCTTCCCGGCAGGAAACAAGACTTCTGATCCTGTTTCTGTTGATGCAGACCGTACCGTGGTGGCCTTGTATAAGTTCCTCAGGAAACATGCATCAATCCCATTCAAGCTCGAGAAACCAACCTCACCTCCAAAACCCGAAAGTCAGGACGCTAAAGAGACTCAGAGTGGCAGTAGTGACGTGAAAGATGAATTATGA 1872 0.4412 MHLDDQNDIVYLTQNIGLLKILDSLENKTNLDRHRSPSSASPAILNPSRMLTRRHIVVVSLTTLLLISLFSLSACKTVENDDDEDLSFLEEADDSSSSHNHHPDPGHSDDDDFAYDDDFGDFSGYGESEANGEAYKLPEVDDKDVVVLKERNFSDVVENNRFVMVEFYAPWCGHCQALAPEYAAAATELKSENVVLAKVDATEENELAHEYDVQGFPTVYFFIDGVHKPYTGQRTKDAIVTWIKKKIGPGIYNITTLDDAERILSSESKVILGFLNSLVGPESEELAAASRLEDDVNFYQTVNPEVAKLFHIKPNVKRPALVLIKKEEEKLNYFAGEFVKSKIADFVSSNKLPLVITFTRENAPSIFESSIKKQLLLFATSNDSEKFIPVFQEAAKFFKGKLIFVYVEVDNEDVGKPVADYFGVTGNAPKVLGYTANDDGKKFVFDGELTTDKIKVFGEDFLEDKLKPFYKSDPVPESNDGDVKIVVGDNFDEIVLDESKDVLLEIYAPWCGHCQALEPIYDKLAKHLRGIESLVIAKMDGTTNEHPRAKADGFPTLLFFPAGNKTSDPVSVDADRTVVALYKFLRKHASIPFKLEKPTSPPKPESQDAKETQSGSSDVKDEL 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1084 623 CDD PDI_a_family 146 243 - -
Dere08g1084 623 PANTHER PROTEIN DISULFIDE ISOMERASE 89 622 - -
Dere08g1084 623 Pfam Thioredoxin-like domain 286 457 - -
Dere08g1084 623 FunFam Protein disulfide-isomerase 352 477 - -
Dere08g1084 623 SUPERFAMILY Thioredoxin-like 478 597 IPR036249 -
Dere08g1084 623 Gene3D Glutaredoxin 477 591 - -
Dere08g1084 623 CDD PDI_a_PDI_a'_C 483 585 - -
Dere08g1084 623 MobiDBLite consensus disorder prediction 92 109 - -
Dere08g1084 623 ProSitePatterns Thioredoxin family active site. 164 182 IPR017937 -
Dere08g1084 623 Gene3D Glutaredoxin 352 476 - -
Dere08g1084 623 FunFam Protein disulfide-isomerase 134 246 - -
Dere08g1084 623 SUPERFAMILY Thioredoxin-like 137 248 IPR036249 -
Dere08g1084 623 NCBIfam protein disulfide-isomerase domain 149 246 IPR005788 GO:0003756
Dere08g1084 623 SUPERFAMILY Thioredoxin-like 350 480 IPR036249 -
Dere08g1084 623 ProSiteProfiles Thioredoxin domain profile. 126 248 IPR013766 -
Dere08g1084 623 SUPERFAMILY Thioredoxin-like 252 362 IPR036249 -
Dere08g1084 623 FunFam Protein disulfide-isomerase 478 591 - -
Dere08g1084 623 CDD PDI_b'_family 362 462 - -
Dere08g1084 623 CDD PDI_b_family 251 350 - -
Dere08g1084 623 MobiDBLite consensus disorder prediction 593 623 - -
Dere08g1084 623 FunFam protein disulfide-isomerase A2 247 351 - -
Dere08g1084 623 Pfam Thioredoxin 145 245 IPR013766 -
Dere08g1084 623 Pfam Thioredoxin 483 570 IPR013766 -
Dere08g1084 623 Gene3D Glutaredoxin 248 351 - -
Dere08g1084 623 ProSitePatterns Thioredoxin family active site. 503 521 IPR017937 -
Dere08g1084 623 Gene3D Glutaredoxin 133 247 - -
Dere08g1084 623 MobiDBLite consensus disorder prediction 90 113 - -
Dere08g1084 623 PRINTS Thioredoxin family signature 212 223 - -
Dere08g1084 623 PRINTS Thioredoxin family signature 163 171 - -
Dere08g1084 623 PRINTS Thioredoxin family signature 171 180 - -
Dere08g1084 623 ProSiteProfiles Thioredoxin domain profile. 461 590 IPR013766 -
Dere08g1084 623 NCBIfam protein disulfide-isomerase 143 623 IPR005792 GO:0003756
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1084 Dere-ChrDere08 14805031 14809220 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1084 08 14805031 14809220 Dere07g0835 07 11857279 11860870 CCT
Dere08g1084 08 14805031 14809220 Dere08g1084 08 14805031 14809220 ECH