Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0835 ATGCTACGTCGACGACTCGTCGTTTTGCTTTCCCTTACTGCTCTTCTCCTCCTGTCCTCCTTCTCTCTCACGTTGTGCAAGACCGGCGAAAACGACAACGACGACGAAGATCTCAGCTTTCTCGAAGAAGTTGATGACAGCTCTGCCTCCCACCACCACCATTACCCAGATCTGGACCATTTCGACGACGACTCCGTCGGCGACGATGATCTCGAGGATTTCTCCGGTTTCGACGAGTCGGATGTCGATGCGGAGGCTTACAAAGAGCCCGAGGTGGATGACAAAGACGTTGTTGTATTAAAGGAGAGTAATTTCAGTGATGTTGTTAAGAAAAATCAGTTTGTGATGGTGGAATTCTATGCGCCCTGGTGTGGTCACTGCCAGGCTTTGGCGCCGGAGTATGCTGCCGCTGCCACCGAGTTGAAAGGAGAGAATGTGATCTTGGCGAAGGTGGATGCCACGGAGGAGAGCGAATTAGCCCAGGAGTATGAGATTCAGGGATTCCCCACTGTCTTCTTTTTTGTCGATGGGGTTCACAAGCCTTATAATGGCCAGAGGACCAAAGATGCTATAGTAACCTGGATTAAGAAGAAGATAGGGCCTGGTGTCTCGAACATAACTACATTGGATGATGCTGAACGCATATTGACCTCTGAAAGCAAAGTTGTTTTGGCCTTCCTCAACTCTTTAGTGGGTCCTGAGAATGACGAGCTAGCTGCTGCATCACGACTTGAGGATGATGTCAATTTTTATCAAACAGTAAATCCTGATGTGGCAAAGCTTTTCCATATTGACCCAAATGTCAAACGCCCTGCTTTGATCCTGGTCAAGAAAGAGGAGGAGAAATTGAACCACTTTGATGGCCAATTTGTAAAATCTGCTATAGCAGAATTTGTGTTCTCCAACAAACTTCCTTTGGTCACATTTTTTACAAGAGAAAGTGCCCAATCAGTTTTTGATAACCCAATAAAGAAACAGCTGTTGCTGTTTGTGCCTTCAAATGATTCAGAGAAGTTACTCCCAGTATTTCAAGAAGCTGCAAAATTCTTCAAGGGAAAGCTGATCTTTGTACATGTGGAATTGGATAATGAAGATGTCGGAAAGCCAGTTTCAGAATTTTTTGGAATAAGCGGGAATGCTCCAAAAGTACTTGCATACACTGGAAATGATGATGGAAAGAAATTTGTGCTTGATGGAGAAGTGACTGTTGAAAAAATTAAGGCATTTGGGGCTGATTTCCTTGAAGACAAGCTAAAACCTTTCTTCAAGTCAGATCCAGTTCCTGAAAATAATGATGGCGATGTGAAAATAGTGGTTGGGGATAACTTTGACGAAATTGTCTTGGATGAGTCTAAGGACGTTCTCCTTGAGATTTATGCCCCTTGGTGTGGCCATTGCCAAGCTCTGGAACCAACATACAATAAGCTTGCAAAACATCTGCGTGGCATTGAGTCCCTTGTCATAGCCAAGATGGATGGAACGACAAATGAGCATCCCAGGGCAAAGACTGATGGATACCCCACTATTCTCTTCTTCCCAGCAGGAAACAAGAGTTTTGACCCTATTACTGTTGATACAGATCGAACAGTGGTAGCCTTTTATAAGTTCCTCAAGAAACATGCATCAATTCCATTCAAGCTCCAGAAACCAACCTCAACTCCCAAACCCGCGAGTTCTGATGCTAAGGAAAGTCAGACTCAGAGTAGCAATAGCGATGTGAAGGATGAACTATGA 1734 0.4452 MLRRRLVVLLSLTALLLLSSFSLTLCKTGENDNDDEDLSFLEEVDDSSASHHHHYPDLDHFDDDSVGDDDLEDFSGFDESDVDAEAYKEPEVDDKDVVVLKESNFSDVVKKNQFVMVEFYAPWCGHCQALAPEYAAAATELKGENVILAKVDATEESELAQEYEIQGFPTVFFFVDGVHKPYNGQRTKDAIVTWIKKKIGPGVSNITTLDDAERILTSESKVVLAFLNSLVGPENDELAAASRLEDDVNFYQTVNPDVAKLFHIDPNVKRPALILVKKEEEKLNHFDGQFVKSAIAEFVFSNKLPLVTFFTRESAQSVFDNPIKKQLLLFVPSNDSEKLLPVFQEAAKFFKGKLIFVHVELDNEDVGKPVSEFFGISGNAPKVLAYTGNDDGKKFVLDGEVTVEKIKAFGADFLEDKLKPFFKSDPVPENNDGDVKIVVGDNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKHLRGIESLVIAKMDGTTNEHPRAKTDGYPTILFFPAGNKSFDPITVDTDRTVVAFYKFLKKHASIPFKLQKPTSTPKPASSDAKESQTQSSNSDVKDEL 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0835 577 FunFam Protein disulfide-isomerase 304 429 - -
Dere07g0835 577 CDD PDI_a_family 98 195 - -
Dere07g0835 577 SUPERFAMILY Thioredoxin-like 430 542 IPR036249 -
Dere07g0835 577 ProSitePatterns Thioredoxin family active site. 455 473 IPR017937 -
Dere07g0835 577 Gene3D Glutaredoxin 429 543 - -
Dere07g0835 577 ProSitePatterns Thioredoxin family active site. 116 134 IPR017937 -
Dere07g0835 577 Pfam Thioredoxin 97 197 IPR013766 -
Dere07g0835 577 Pfam Thioredoxin 435 520 IPR013766 -
Dere07g0835 577 Gene3D Glutaredoxin 304 428 - -
Dere07g0835 577 MobiDBLite consensus disorder prediction 547 571 - -
Dere07g0835 577 CDD PDI_a_PDI_a'_C 435 537 - -
Dere07g0835 577 ProSiteProfiles Thioredoxin domain profile. 413 542 IPR013766 -
Dere07g0835 577 MobiDBLite consensus disorder prediction 547 577 - -
Dere07g0835 577 Pfam Thioredoxin-like domain 239 409 - -
Dere07g0835 577 FunFam Protein disulfide-isomerase 430 543 - -
Dere07g0835 577 NCBIfam protein disulfide-isomerase 95 577 IPR005792 GO:0003756
Dere07g0835 577 PRINTS Thioredoxin family signature 164 175 - -
Dere07g0835 577 PRINTS Thioredoxin family signature 115 123 - -
Dere07g0835 577 PRINTS Thioredoxin family signature 123 132 - -
Dere07g0835 577 NCBIfam protein disulfide-isomerase domain 100 198 IPR005788 GO:0003756
Dere07g0835 577 SUPERFAMILY Thioredoxin-like 90 200 IPR036249 -
Dere07g0835 577 SUPERFAMILY Thioredoxin-like 206 314 IPR036249 -
Dere07g0835 577 FunFam protein disulfide-isomerase A2 199 303 - -
Dere07g0835 577 FunFam Protein disulfide-isomerase 86 198 - -
Dere07g0835 577 Gene3D Glutaredoxin 200 303 - -
Dere07g0835 577 CDD PDI_b'_family 324 414 - -
Dere07g0835 577 CDD PDI_b_family 203 302 - -
Dere07g0835 577 Gene3D Glutaredoxin 85 199 - -
Dere07g0835 577 ProSiteProfiles Thioredoxin domain profile. 65 200 IPR013766 -
Dere07g0835 577 PANTHER PROTEIN DISULFIDE ISOMERASE 8 575 - -
Dere07g0835 577 SUPERFAMILY Thioredoxin-like 302 432 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0835 Dere-ChrDere07 11857279 11860870 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1084 08 14805031 14809220 Dere07g0835 07 11857279 11860870 CCT