Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1073 ATGACATTTAGGCTTTGTATGGTACCAGGGAGGAAGAGGCAATGGAACCAGAAAGAGAGAGGCAAAAGAAGGGAAGGGCGTTTGATTTGCCGCTATTTCAAGGGTTTTCGGATCAGGGGAGCTCCTGCTTCCACCTCTGCTGATTCCATTTCTCTTTCTTTCTCCTCCAATATTTTTCCTCCCGACATGTTTTGGAAGCTCACTTCTATATCTGCCTCCTCTCCTGTGGATGCAATATTGGACAAGGAGAACTTCACTTTGGAAGAGCTTTTGGATGAAGAGGAAATAATCCAAGAATGCAAGGCCTTAAACAGTCGTCTCATTAACTTTCTGAGGGATAGAGCTCAGGTTGAGCAATTACTACACTACATTATTCAAGAACCACCAGAAGATGCTGAAAGCAAGCGGGCCTTCAAGTTTCCATTCATTGCCTGTGAGATTTTTACATGTGAAATTGATGTCATTTTGAAGACTTTGGTTGAGGAAGAAGAGCTGATGAACTTACTATTCTCCTTCTTGGAGCCTGACCGTCCTCATAGTACCTTGCTGGCTGGGTACTTTAGCAAGGTTGTTGTTTGCCTAATGATTCGCAAGACTGTGCCTCTTATGAATTATGTTCAAGCCCATCAGAATGTTTTTCGCCAATTGGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGCGCTGATGACCATGTGTATCCCAATTGTATAGACGTGATACAATGGTTGGTTGATAGCAACCTGCTAGAGATGATTGTTGATAAATTAAGTCCATCTAGTCCTCCTGAAGTTCATGCCAATGTAGCTGAAACGTTGTGTACGATAACTCGAAATGCCTCATCTGCTCTTGCAATTAAACTTTCAAGCCCAAGTTTTGTTGCAAGAATTTTGGGTCATGCTTTGGAAGATTCACAATCAAAGTCTAGCCTTATTTACTCTCTTTCAGTGTGCATTTCTTTGTTGGATTCCAAAAGATCTTCCAGCTCTTTTCCCCTTTTTCATTCTTTCCGTAGTCAACACATGTATGAGACTTCAGTTCCTGTTAACCCAGAAACGATTGGTGCAATGCTTCAAAAACTCGGTGACTTGCTCGTGCTTTTGCATGTGTCATCTGATGAGAAGGTATTGCCTACAACATATGGAGAATTAAGGCCTCCACTTGGGAAACATCGATTAAAGATTGTTGAGTTTATTGCAGTACTTTTAAAAGCTGGAAATGAAGTGGCAGAAATAGAATTGGTCAACTCAGGAACCATTCGACGAGTCATTGATCTTTTCTTTGAATTTCCATACAATAATGCGTTACACCATCACGTAGAAAGTATAGTACTATCATGTTTGGAGAGCAAAACTGATGTCATTGTTGGTCATCTTCTCCGAGAGTGTGATTTTATTGGAAAAGTTCTCCAAGCGGATAAAAACCCTGTTCTTTCTGGTGACAGCAACCAGCCAACTGTACCTGCTGCTGGAAAACAGGCACCACGAGTGGGAAACATTGGACATATAACTCGATTTGGTAACAAACTTGTTCACTTGGCTCATAACCACAGCTGCATACAGGCCTGTCTACAGGAAAGTAGTGAGTGGAATGAGTGGCAAGCTACAGTTCTGCAGGAGCGTAATGTGGTTGAGAATGTTCTCCGTTGGGCTTGTGGACGACCTACTGCATTACAAGATAGGATGAGGGATAGTGATGATGATGACCTTCATAATAGGGACTACGATGTTGCGGCATTAGCAAATAATTTGAGCCAAGCTTTTAAATATAAAATTTATGGAAATGAGGATAATGAAGAGGACCATGGAGGACTTGATCGAGATGATGAGGATGTCTACTTTGATGATGACTCTGCTGAAGTAGTCATATCGTCTCTAAGACTTGGTGATGATCAAGGAAGTAGTCTTTTTACAAACTCCAACTGGTTTGCATTCCAAGATGACAGAACTGGTAATTCACCTGGGGGTACATCGTCATCTGAGATGATGGATGAGATTAACTTGAATGGAGCGGCAAATGGTGGTAACAACAGTAGTGATGATGAGGTAGTGGTAGGAGAGGATGAAGAATTGGCTGAAAGCAAAAATGCTGTGAATGACACATCTAACCTTGGCACAAACTTCTTCAGTGGATTGACTGATAGCAATTCCATGAATGGTGGCACATTAAACTTGGAAAGTGAGAAGGCAAGTGCTGCACATGATATGGGATTCTTCCGGTTTGAGGCATCAGATGAGGACTTATTTGGGGCTAGGCCATTACCTGACTGGGTGGGATGGGCTGAACCGTCAGATATGCAAGTTCCTGGTTCAAGCACGAATCCCTTTGTTGATCATGATGAGTCTGATGGCAATCTATCCACTAAACCTCAATTAAGCAGCCCTAATTCTAATTCACCTTCAAATGGGGAATCCGCATCTGCAAATGGTTTGACAACTACTAGCGATTCAAGTGAGCGGGAAGGGGACTTGAGTCAAAGATCGGTAGCAGTACCCTCTCTTTTTGAAGAGGATGTTGAATTTGTAGGTGTGGAATTAGAAGGCACTGAGAAAGCTATGGAACAGGCTCTCAAAGAAGGGATAGTCGGGGAAGCAGGACCATTGAAAAGAAATGTAATCCCGAAAGTGCCAGAAAAGGATAACCCCGAGGAGGGTGGACCTGGAATGAAGGAATTCAATGACGCCAATTACTGGAGGGTCGACCAAGAGGTTGCTGTTCTGGAGTGA 2745 0.4255 MTFRLCMVPGRKRQWNQKERGKRREGRLICRYFKGFRIRGAPASTSADSISLSFSSNIFPPDMFWKLTSISASSPVDAILDKENFTLEELLDEEEIIQECKALNSRLINFLRDRAQVEQLLHYIIQEPPEDAESKRAFKFPFIACEIFTCEIDVILKTLVEEEELMNLLFSFLEPDRPHSTLLAGYFSKVVVCLMIRKTVPLMNYVQAHQNVFRQLVDLIGITSIMEVLVRLVGADDHVYPNCIDVIQWLVDSNLLEMIVDKLSPSSPPEVHANVAETLCTITRNASSALAIKLSSPSFVARILGHALEDSQSKSSLIYSLSVCISLLDSKRSSSSFPLFHSFRSQHMYETSVPVNPETIGAMLQKLGDLLVLLHVSSDEKVLPTTYGELRPPLGKHRLKIVEFIAVLLKAGNEVAEIELVNSGTIRRVIDLFFEFPYNNALHHHVESIVLSCLESKTDVIVGHLLRECDFIGKVLQADKNPVLSGDSNQPTVPAAGKQAPRVGNIGHITRFGNKLVHLAHNHSCIQACLQESSEWNEWQATVLQERNVVENVLRWACGRPTALQDRMRDSDDDDLHNRDYDVAALANNLSQAFKYKIYGNEDNEEDHGGLDRDDEDVYFDDDSAEVVISSLRLGDDQGSSLFTNSNWFAFQDDRTGNSPGGTSSSEMMDEINLNGAANGGNNSSDDEVVVGEDEELAESKNAVNDTSNLGTNFFSGLTDSNSMNGGTLNLESEKASAAHDMGFFRFEASDEDLFGARPLPDWVGWAEPSDMQVPGSSTNPFVDHDESDGNLSTKPQLSSPNSNSPSNGESASANGLTTTSDSSEREGDLSQRSVAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNVIPKVPEKDNPEEGGPGMKEFNDANYWRVDQEVAVLE 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1073 914 MobiDBLite consensus disorder prediction 766 837 - -
Dere08g1073 914 MobiDBLite consensus disorder prediction 879 893 - -
Dere08g1073 914 Pfam SIT4 phosphatase-associated protein 418 552 IPR007587 GO:0019903|GO:0043666
Dere08g1073 914 Pfam SIT4 phosphatase-associated protein 193 414 IPR007587 GO:0019903|GO:0043666
Dere08g1073 914 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 63 877 IPR007587 GO:0019903|GO:0043666
Dere08g1073 914 MobiDBLite consensus disorder prediction 772 825 - -
Dere08g1073 914 MobiDBLite consensus disorder prediction 878 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1073 Dere-ChrDere08 14711242 14722328 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1073 08 14711242 14722328 Dere07g0820 07 11715639 11725391 CCT
Dere08g1073 08 14711242 14722328 Dere08g1073 08 14711242 14722328 ECH