LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere07g0820	ATGTTTTGGAAGCTCGCATCTCTGTCTGCTTCTTCTCCTGTTGAGGCAATATTGGACAAAGAGAATTATACTTTAGAAGAACTTCTGGATGAAGAAGAAATAATCCAAGAATGCAAGGCCTTAAATAGTCGTCTCATTAACTTTCTGAGAGATAGAGCTCAGGTGGAGCAACTACTATGCTACATTATTGAAGAGCCACCAGAAAATGCTGAAAGTAAACGGACCTTCAAGTTTCCATTTATTGCTTGTGAGATTTTTACATGTGAAATTGATGTTATTTTGAAGACCTTGGTGGAGGAAGAAGAGCTGATGAACTTGTTATTCTCCTTCTTGGAGCCTAATCGTTCTCATAGCGCCTTGCTAGCTGGGTATTTTAGCAAGGTTGTTGTTTGCTTAATGATCCGGAAGACAGTGCCACTTATGAATTATGTTCGAGCCCATCAGAATGTTTTTGAACAACTGGTTGATTTGATAGGAATTACGTCCATTATGGAGGTTTTGGTTCGATTAGTAGGCGCTGATGATCATGTGTATCCCAATTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACCTTCTAGAGATGATTGTTGATAAATTAACACCTTCTAGTCCTCCTGAAGTTCATGCCAATGTAGCTGAAACATTATGTACAATAACTCGAAATTCATCATCTGCTCTAGCAATTAAACTTTCAAGCCCAAGTTTTGTTGCAAGAATTTTGGATCATGCACTGAAAGATTCTCTGTCAAAGTCCAGCCTTGTTCACTCATTGTCTGTGTGTATTTCTTTGTTGGATCCAAAAAGATCAGCATTTCCTCCTCCCCTTGTTCCTTGTTTCCGAAATCAAAATTTTTATGAGGCTTCAATGCCAGTTAACCCAGAGACAATTGGTGCAATGCTCCCAAAACTTGGTGACTTGCTTATGCTTCTAAATGTGGCAACTGATGATCTGGTATTGCCTACAACATATGGAGAATTGAGGCCTCCACTTGGGAAGCATCGATTCAAGATTGTGGAGTTTATAGCAGTGCTTTTGAGAACTGGAAATGAAGTGGCTGAAAAAGAATTGGTCAACTCAGGAACCATATGGCGAGTCATTGATCTTTTCTTTGAGTATCCATATAACAACTCGCTGCACCATCATGTAGAAAGTGTCATAATATCATGTTTGGAGAGCAAAAGTGATGCTGTAATTGATCATCTTCTTCTAGAGTGTGATTTAATTGGAAAATTTCTCCAAGCAGATAAACATCCTATTCTTACCGGGATCAACAATCAGCCCTCTGTACCTGCTGCTGGAAAACAGGCACCGCGGACAGGAAACATTGGACATATTACTCGAATTGCTAACAAACTTATTCACTTGGCACATAACCAAAGCCGCATACAAGCATGTATTCAGGAAAGTAGTGAGTGGAATCAGTGGCAAACTACAGTTCTGCAGGAGCGGAACATGGTTGAAAATGTTCACTGTTGGGCTTGTGGACGCCCAACTGCATTGCAAGATAGGATCAGGGATAGTGATGACGATGATCTTCATGACAGAGATTATGATGTTGCAGCTTTAGCAAATAATTTGAGCCAACCTTTTAAATATAATATTTATGGAACTGAGGAAAATGAAGAGGACCATGGAGGTCTTGATCGTGATGCTGAGGATGTCTACTTTGACGATGACTCTGCTGAGGTGGTCATATCGTCCTTAAGACTTGGTGATGACCAAGGGAGTAGTCTGTTCACAAACTCCAATTGGTTTGCATTCCAAGATGACAGAATTGGTGATGCACCTGGGGGCACTTCATCCTCTGAGATGATGGATGAGATTAACTTGAATGGTGCTGCAAATGGTAGTAACAACAGTAGTGATGACGAAGTTGTGATTGGGGAGGATGAAGGATTGGCTGAAAGCAAAAGTACCGTTAATGGCCCATCCAGCTCAAGCTCAAATTTCTTTAGTGGATTAACTAGTATCAATTCCATGAATGGTGGCATCTTGAATTTGGAAAGTGAGAAGGCAAGTGTGTCAAATGATATGGGATTCTTCGGGTTTGAGGCACCAGACAGTGAGGACTTGTTTGGGGATAGGCCGCTACCTGACTGGGTGGGATGGGGTGAACCATCAGATATACAAGTTGCTAGTTCGAGCACGAACCCCTTTATGGATCATGATGACTCCGATAGCAATCCTTCCACTAAACCTCAATTAGGCAGCCCTAGTCCTACATCTTCAAATGGGTCACCAACTGCTAGAGAAAGTAGCGAGGGGGATGGTGACTTGAGTCAAAAAACAGCAGCAGTACCCTCCCTATTTGAAGAGGATGTTGAATTTGTAGGTGTGGAATTAGAAGGTACTGAGAAGGCTATGGAACAGGCTCTCAAAGAAGGAATAGTTGGGGAAGCAGGACCTTTGAAAAGGAACACTTCCCCAAAGGTGGCAGATAGAGAGAATTCTGAAGAGGGTGGACCTGGTGGTATGAAGGAATTCAATGACGCAAATTACTGGAGGGTGGACCAAGAGGTTGCTGTTCTGGAGTGA	2541	0.4191	MFWKLASLSASSPVEAILDKENYTLEELLDEEEIIQECKALNSRLINFLRDRAQVEQLLCYIIEEPPENAESKRTFKFPFIACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRSHSALLAGYFSKVVVCLMIRKTVPLMNYVRAHQNVFEQLVDLIGITSIMEVLVRLVGADDHVYPNFIDVMQWLAESNLLEMIVDKLTPSSPPEVHANVAETLCTITRNSSSALAIKLSSPSFVARILDHALKDSLSKSSLVHSLSVCISLLDPKRSAFPPPLVPCFRNQNFYEASMPVNPETIGAMLPKLGDLLMLLNVATDDLVLPTTYGELRPPLGKHRFKIVEFIAVLLRTGNEVAEKELVNSGTIWRVIDLFFEYPYNNSLHHHVESVIISCLESKSDAVIDHLLLECDLIGKFLQADKHPILTGINNQPSVPAAGKQAPRTGNIGHITRIANKLIHLAHNQSRIQACIQESSEWNQWQTTVLQERNMVENVHCWACGRPTALQDRIRDSDDDDLHDRDYDVAALANNLSQPFKYNIYGTEENEEDHGGLDRDAEDVYFDDDSAEVVISSLRLGDDQGSSLFTNSNWFAFQDDRIGDAPGGTSSSEMMDEINLNGAANGSNNSSDDEVVIGEDEGLAESKSTVNGPSSSSSNFFSGLTSINSMNGGILNLESEKASVSNDMGFFGFEAPDSEDLFGDRPLPDWVGWGEPSDIQVASSSTNPFMDHDDSDSNPSTKPQLGSPSPTSSNGSPTARESSEGDGDLSQKTAAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNTSPKVADRENSEEGGPGGMKEFNDANYWRVDQEVAVLE	846

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere07g0820	846	PANTHER	SIT4 YEAST -ASSOCIATING PROTEIN-RELATED	1	812	IPR007587	GO:0019903\|GO:0043666
	Dere07g0820	846	MobiDBLite	consensus disorder prediction	694	772	-	-
	Dere07g0820	846	MobiDBLite	consensus disorder prediction	710	756	-	-
	Dere07g0820	846	Pfam	SIT4 phosphatase-associated protein	131	356	IPR007587	GO:0019903\|GO:0043666
	Dere07g0820	846	Pfam	SIT4 phosphatase-associated protein	357	491	IPR007587	GO:0019903\|GO:0043666
	Dere07g0820	846	MobiDBLite	consensus disorder prediction	796	832	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere07g0820	Dere-ChrDere07	11715639	11725391	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere08g1073	08	14711242	14722328	Dere07g0820	07	11715639	11725391	CCT