LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere08g1005	ATGGCTATTGCTGGACTACACAATGTGTCTGTGCTTGACTCTTCTTTCCTTAGGGACTCCCATTCTCAATCCCCTAGGAGACGAGGGGATGGAGGGAGTGGAAGCACCCGGTCATCTTCGATCTTGCAAATGTGGCGAGATATTGAGGATGAGCATGTGGTGAGTCAAGTCCAAGGAAGACCTGGCGAAGGATTGCTTCAACAAAGGAGTAATGAGTTGATTGCTGACCTCCAGCAGGAAAATATGTCGGGTAGCCATGAGAGAGGACAGAGGCATGCTATAGAAGATGCAATTTTGGTTGAGAATGATTGCGAAACATGGTCACAGTCACAAAGTCAGCATGAGTCCCCTGATGAACAGGATGAATTAAACAATTCTAGTTGTGATAACTCTTCTGATTTTGGAGAAGTTGAAAGGGAAAGGGTGAGGCAAATTTTCAGGGAATGGATGAATAGTGGTGCTAGGGACCATGCCGAAAACATTTCCCAAAGTAATAATGGTTCAAGATCAGAATGGCTTGGTGAAACTGAGCAGGAGAGGGTGAGAATCATAAGGGAGTGGGTACAATTAAGTAGCCAGCAGAGAGTTATTTCTTCTGGGGACAACGGGGAAGAACAATCAGCTGAAATTGGTACACAAATTGAACGTGTTCGTGATGGATTTGCTGTTAATCAGAATGAAGGTCAAATTGAGCATACACGGAGGAGTATTCGTAAATTATGTGGCAGACAGGTTCTGCTTGATATGCTTAAGAACGCTAAGAGGGAAAGGGAAAGAGAAGTACAAGAATTATTGGACCATCGGGCTGTATCTCATTTCCCCCATCGCAATCGCATTCAGGCATTGCTTAGGGGCAGGTTCCTGAGAAATGATAGATCAGTTGATATTAACCGGTCCTCTTCCTTGGCTGAAAGTGAATTAGGATTACTGAGGCAAAAACAGACTGTATCAGGTCTGAGGGAGGGATTTTTCTCTAGAAAGGATAATTCTGGTAGTAATCAATCCTGCAATCTATCAGATACCTCATCCAACAGTGGCATTGATAATAATTCAAATGAACAAACTGAAGCTGGCGGATTACATACAGTCTCAACTGTACATCTTGAACAGTCTGAGCCTAATGATAGACTTGGGATATCAGATGGTCTGAATTGTATACGAGGAACAATAAATGAAAATTTAGATTGTCAAGACTTTGCTGCTCATGGAGAAGGAAGGCAGTCACAGCTTATGGAAATTGAGTCAAGAGATTGTCAATCGTCATCCAGTGTTGAGATGGGGAGAAGATATGGCAGTGGACAAGATGTTGTTGGGATGACAATTGAAGATACTACAAATGGACTTATGCAACAAAGTTTTCAAATTGAAGATGCAGAAAATAGCAATGTGCAGGAATTTAATGAGGTACATCATGAAGAACCTGAGTTGAGTGTTACAAGTAATGATGATAATGGTTTATCAACTCATAGCAATGATATGGAAGCTACTATGGTTAATGATGAAAATAGGAATGAATCTGCTGCCCTGGAAGGACAGCAGCGTGAAGAACTTATTGAAATTGAAGGAAGTGACAGGCATCAAACTACTGTTGAATGGAGAAATAGCAGAGAGGAAAGTGTGGATGAGAATCCTCTCAGTGGTACAGCCAATGAGTGGCCTCAAAACATTTTGGGCAATGAAGATGGGGAAAACTTGCATCTACCAGAAGCCCCTGAAATGTGGCAAGAAGATGGTGGCTTTCAGGAGGCTGTGGAAAATTGGTTGGGTGGACCTTCTGATCATGAAGTTGCTTCAGTTGGTAGAATTCATGGATTTTACTTTCCTGACGATGACAATGTGAATAGTGTGGAACTCAGGGAACTGCTAAATAGGAGAAGTGTCTCTAACCTCCTTCGCAGCAGTTTTCGTGAGAGTCTTGACCAGTTGATACAATCATATGTTGAAAGGCAAAGTCATGCTCACGTTGAGTGGGAGCTGCAAGAAACAACCCTTTCTGCCGCCTCAGTGGAACAGGACATGGAGCAGCAGAGTAGGGATCAGATTGTTGGTCGGGAAGATACTATCAACAGTCCACTTGACCAACCCTCATCTCCAACACCTCCTCAGCCTCTCTGGGAACGGCAGTCACGCCATGACAACTGGCCACAGGCTGACATGAATACTCAGCGTCTAGGAATCGGGCATTCATTTTCTTTGGAGTGGGAGATTATCAATGACTTGAGAATTGACATGGCTAGACTACAGCAAAGAATGAATAATATGCAAAGAATGCTGGAGGCTTGTATGGATATGCAGCTTGAGTTGCAGCGCTCAATAAGACAAGAAGTTTCTGCCGCCCTTAATCGCTCAGCTAGTTCATCAGAAATGCATGACCATGATGCACCTGATGATAAATCTAAATGGGAATGTGTGAGAAAAGGACTCTGTTGTATATGCTGCGAGAGCACTATTGATTCTTTGTTGTACAGATGCGGGCACATGTGA	2484	0.432	MAIAGLHNVSVLDSSFLRDSHSQSPRRRGDGGSGSTRSSSILQMWRDIEDEHVVSQVQGRPGEGLLQQRSNELIADLQQENMSGSHERGQRHAIEDAILVENDCETWSQSQSQHESPDEQDELNNSSCDNSSDFGEVERERVRQIFREWMNSGARDHAENISQSNNGSRSEWLGETEQERVRIIREWVQLSSQQRVISSGDNGEEQSAEIGTQIERVRDGFAVNQNEGQIEHTRRSIRKLCGRQVLLDMLKNAKREREREVQELLDHRAVSHFPHRNRIQALLRGRFLRNDRSVDINRSSSLAESELGLLRQKQTVSGLREGFFSRKDNSGSNQSCNLSDTSSNSGIDNNSNEQTEAGGLHTVSTVHLEQSEPNDRLGISDGLNCIRGTINENLDCQDFAAHGEGRQSQLMEIESRDCQSSSSVEMGRRYGSGQDVVGMTIEDTTNGLMQQSFQIEDAENSNVQEFNEVHHEEPELSVTSNDDNGLSTHSNDMEATMVNDENRNESAALEGQQREELIEIEGSDRHQTTVEWRNSREESVDENPLSGTANEWPQNILGNEDGENLHLPEAPEMWQEDGGFQEAVENWLGGPSDHEVASVGRIHGFYFPDDDNVNSVELRELLNRRSVSNLLRSSFRESLDQLIQSYVERQSHAHVEWELQETTLSAASVEQDMEQQSRDQIVGREDTINSPLDQPSSPTPPQPLWERQSRHDNWPQADMNTQRLGIGHSFSLEWEIINDLRIDMARLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSASSSEMHDHDAPDDKSKWECVRKGLCCICCESTIDSLLYRCGHM	827

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere08g1005	827	PANTHER	RING/U-BOX SUPERFAMILY PROTEIN	452	827	-	-
	Dere08g1005	827	Coils	Coil	243	270	-	-
	Dere08g1005	827	MobiDBLite	consensus disorder prediction	105	136	-	-
	Dere08g1005	827	MobiDBLite	consensus disorder prediction	471	491	-	-
	Dere08g1005	827	MobiDBLite	consensus disorder prediction	17	38	-	-
	Dere08g1005	827	MobiDBLite	consensus disorder prediction	524	540	-	-
	Dere08g1005	827	MobiDBLite	consensus disorder prediction	687	708	-	-
	Dere08g1005	827	Coils	Coil	737	764	-	-
	Dere08g1005	827	MobiDBLite	consensus disorder prediction	326	356	-	-
	Dere08g1005	827	MobiDBLite	consensus disorder prediction	323	356	-	-
	Dere08g1005	827	MobiDBLite	consensus disorder prediction	541	557	-	-
	Dere08g1005	827	MobiDBLite	consensus disorder prediction	524	564	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere08g1005	Dere-ChrDere08	14021602	14025538	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere08g1005	08	14021602	14025538	Dere07g0735	07	10745734	10750081	CCT
	Dere08g1005	08	14021602	14025538	Dere08g1005	08	14021602	14025538	ECH