Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0914 ATGACCGAGGTCCTCCATTCCTCATCCCATTTTTCTTCCTCGTTGAAGAGAACCTCTTCCTCTTCGTCTTCCCTGTCGCTTGTGCCCCTGTCTTCATTGTCTTGCGCAGTCCCTCCCAGCGATGGCATTTTCGTTACCAGCGACCAAGAACCTCCGTCGCCGTCTTCGGTAACCGTGGACGGTTGTTCGACGGCCACGAACTTTGATACTGAGGAGCTGAAGGACAGGGACAAGCACGGGACCGAGCAGCTTTCTGTTTTGGCTCTTCTTGTGACCCTTTTCAGGAAATCCTTGGTTGCTTGTAAGAGTGACAGGAGGGAGCTCTGCGTGATGGAGATCGGATGGCCGTCCAATGTGCGCCATGTTGCACATGTTACGTTTGACAGGTTCAATGGTTTCTTGGGCTTGCCTGTCGAGTTCGAACCTGAAGTGCCCAGAAGGCCTCCCAGTGCTAGTACAACTGTATTTGGAGTTTCAACGGAATCCATGCAGTTATCATATGACTCAAGAGGGAACAGTGTGCCAACAATTCTGCTACGGATGCAGAGACGCTTATACGCTCAAGGAGGGTTGCAGGCAGAGGGGATTTTCAGAATCAATGCAGAAAATAGTCAAGAGGAATATGTTAGGGACCAATTAAATAGCGGAGTGGTTCCACAAGGCATTGATGTTCATTGTTTGGCGGGACTTATCAAGGCTTGGTTTCGGGAGCTGCCTAGGGGTGTTCTGGATTCTTTAGCCCCGGAGCAGGTAATGCAATGCCAGACTGAAGAGGAGTGTGCTGAACTAGTGAGGCATCTACCTCCTACTGAAGCTGCCCTCTTGGACTGGGCCATCAATTTGATGGCTGATGTTGTACTGCAGGAACATCTGAACAAGATGAATGCACGCAATATTGCCATGGTTTTTGCGCCAAACATGACTCAGATGGCAGACCCTTTGACCGCATTAATGTACGCAGTTCAAGTGATGAACTTCTTAAAAACACTCATATTAAGGACCCTCAGGGAAAGAAAGGATTCATTGGTAGAATCTTCTCCTCCATTTCATTTCGAGCCTTCTGATGAGAATGGGGACCATAGCCCTTTGCAGTCCTGCCAGGAAGATACTAATGAAGAAAATGAAGAGGCTCAGGATAACTTCAGTTGTGAGAAAACTGTCCCAAAATATTCCCCGGATTCCCCTCACCGAAGCAATAACTTAACTGGGGAAGAATCTGGCGGCTTGTTAACCTCTTCTGAGCATCTAGTTTCTGATGGAGCTTTATATTGTGAGTTTCCACCCAATGGAAATGCTGGCAAGACCAAGACTGATCAATCAAGTAATTCAAACACCAGAAAGGTGACAAAGAAAACCAGAGTCCAGCAACCGACAATACATGGAACTGTTCCTGTTGAGAAGAGGGGGATTAGCAATCTGAGTCGTTTAGATTCAAGGTCAGAGAGGATAGAAGCCTGGCGCCTTATCCAAAAACAGAAACGTGCTGAAGATCGTAGAGACCAACATCCATTGACATGTGAATCCAATGTCACGAAACAGTACATGAGGCATGCCACGTTGCCTGCAATATTGAATCGGGTGAAGCCACTTGGGCAGCTAGCAAGTGGTTGGTTGTGTGATGATGAAGGATCAAGCTATACTCGTGCCTTTTTTCCCACTTGGTCTCTGCCTCTCAACCTTATTTTCTTGCTTTGCTGTTCTCTTGAAAGCATCAACCTATTGAATACTGGAAAGATAGCAAAGGCTATGGCTTCCGGTGGGAGTCTGCAACACATCTTCGAAAACCCATTGCCAGAAAATCCAACTCTGCTTCAATCCCTCTCAGTGAACCAAATTAGACCCGTCAAACCCATTGACGACTCCTCCTTTACTGAGTTATTTGGTGAACTTCATTTCAAAGAGAGTCCTCGACCATCCCCTTCATCTTCCCTTGCTACTACTTTACCATCAGTTGACCTTCAAGAGCTTAGCTCTGACATAAACCAAACCTGTGTTTCGAGCACCCCAGAAGGTGTTGGTCTCGAAAACCCATTGCCAGAAACGCCAACTCTGCTTGAATCCCTCTCATTGCACAAAATTAAAGCCGTCAAACCCGTTGAAGAATCCTGCTTTACTGAGTTATTTGGTGAACTCCATTTCAAGGAGAGTCCTAAACCATCCCCTTCTTCATCTTCCCTTGTTTCTACTTCACCATCAACAGACCTTCAAAAGCTTGATCAGAAAGATGTTTCTGATTCAACACAGAGCAGCCCGGAAACTACTTGCTCCAATCGTCACAAAAGGAGCGACAGTTTTTCGTCATTGAATTCTGAAAGTCTGCAATTTTGCACAGAGGGTCTTGGTTTTGAAAGCTCAGATGATGTGGAAGACTTGAAGGCTGGAATGGATGAATATTGTTGGGAAACTCGAAGCGAGAAAGCGGGCATCAAGAAGAAGAATTTGGCTTCCGAAGATTCACATGGGGAATGCAGTAGGTCAAGAGTAAGTGGGGTGGAGTACCCTCCTCCTATTTCATGCATAGGGAGGACTGGGAAGCCTTGGGTTTGCTTTAAGTCTTACAGGAACAATGGAAGATTTGTTTTGAAAGAAATAAGAATACCCAAACGGGAGTTTCTGCATGCTTATAGAGAAGATGGAAGGCTGAAGCTGCACTTTGTTCTGCCTGATGATGAGTTTCTAGATGAACAGGATGAGGAAGAAGAGGATGACGATGCAGAAAGTATTAATGAGGAAGAAAAAGATGATGGTGTAGTAGGTATAGATAGGGGGGAAGAAAACATGGAAAATGAATATGGTAGTTGTATAAGAGGTCAAGTTCATGAAGGAAAAGAGATTGATGTCTAG 2844 0.4568 MTEVLHSSSHFSSSLKRTSSSSSSLSLVPLSSLSCAVPPSDGIFVTSDQEPPSPSSVTVDGCSTATNFDTEELKDRDKHGTEQLSVLALLVTLFRKSLVACKSDRRELCVMEIGWPSNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRPPSASTTVFGVSTESMQLSYDSRGNSVPTILLRMQRRLYAQGGLQAEGIFRINAENSQEEYVRDQLNSGVVPQGIDVHCLAGLIKAWFRELPRGVLDSLAPEQVMQCQTEEECAELVRHLPPTEAALLDWAINLMADVVLQEHLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLILRTLRERKDSLVESSPPFHFEPSDENGDHSPLQSCQEDTNEENEEAQDNFSCEKTVPKYSPDSPHRSNNLTGEESGGLLTSSEHLVSDGALYCEFPPNGNAGKTKTDQSSNSNTRKVTKKTRVQQPTIHGTVPVEKRGISNLSRLDSRSERIEAWRLIQKQKRAEDRRDQHPLTCESNVTKQYMRHATLPAILNRVKPLGQLASGWLCDDEGSSYTRAFFPTWSLPLNLIFLLCCSLESINLLNTGKIAKAMASGGSLQHIFENPLPENPTLLQSLSVNQIRPVKPIDDSSFTELFGELHFKESPRPSPSSSLATTLPSVDLQELSSDINQTCVSSTPEGVGLENPLPETPTLLESLSLHKIKAVKPVEESCFTELFGELHFKESPKPSPSSSSLVSTSPSTDLQKLDQKDVSDSTQSSPETTCSNRHKRSDSFSSLNSESLQFCTEGLGFESSDDVEDLKAGMDEYCWETRSEKAGIKKKNLASEDSHGECSRSRVSGVEYPPPISCIGRTGKPWVCFKSYRNNGRFVLKEIRIPKREFLHAYREDGRLKLHFVLPDDEFLDEQDEEEEDDDAESINEEEKDDGVVGIDRGEENMENEYGSCIRGQVHEGKEIDV 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0914 947 MobiDBLite consensus disorder prediction 432 456 - -
Dere08g0914 947 MobiDBLite consensus disorder prediction 384 408 - -
Dere08g0914 947 MobiDBLite consensus disorder prediction 717 765 - -
Dere08g0914 947 MobiDBLite consensus disorder prediction 894 911 - -
Dere08g0914 947 MobiDBLite consensus disorder prediction 343 408 - -
Dere08g0914 947 Pfam Fantastic Four meristem regulator 832 885 IPR046431 -
Dere08g0914 947 CDD RhoGAP 175 331 - -
Dere08g0914 947 ProSiteProfiles CRIB domain profile. 113 126 IPR000095 -
Dere08g0914 947 MobiDBLite consensus disorder prediction 714 765 - -
Dere08g0914 947 SMART PBD_5 113 147 IPR000095 -
Dere08g0914 947 MobiDBLite consensus disorder prediction 894 923 - -
Dere08g0914 947 ProSiteProfiles Rho GTPase-activating proteins domain profile. 158 343 IPR000198 GO:0007165
Dere08g0914 947 CDD CRIB 111 151 - -
Dere08g0914 947 Pfam RhoGAP domain 175 309 IPR000198 GO:0007165
Dere08g0914 947 SUPERFAMILY GTPase activation domain, GAP 152 332 IPR008936 -
Dere08g0914 947 Gene3D CRIB domain 110 142 IPR036936 -
Dere08g0914 947 SMART RhoGAP_3 172 335 IPR000198 GO:0007165
Dere08g0914 947 PANTHER MKIAA1688 PROTEIN 1 451 IPR044785 GO:0005096
Dere08g0914 947 FunFam Rho GTPase-activating protein 5 143 336 - -
Dere08g0914 947 Gene3D Rho GTPase activation protein 146 341 IPR008936 -
Dere08g0914 947 MobiDBLite consensus disorder prediction 427 456 - -
Dere08g0914 947 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0914 Dere-ChrDere08 12964844 12971487 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0914 08 12964844 12971487 Dere07g0650 07 9608472 9612147 CCT