Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0650 ATGACCGAGGTCCTCCATTCCCCTTCCCATTTTTCTTCCTCGTCAAGGAGAAGCACTTCCTCTTCTTCGTTGTCTTGCACACCACTTCCCAGTGATGGCATTCTCTTTATCCAAAAAGCACAGACTCGCTCGTCTTCTGTAGCCGAGGAGGGTTGTTGTCCGGCGACGTGTTGCGACACTGAGGAGCTCAAGGACGGAGATAAGCACAAGACCGAACAGCTTTCTCTTTTGGCGCTTCTTGTGACGTCTTTTAGGAAATCCTTGATTGCTTGTAAGAGTGAGAGGAGGGAGCTCTGCGCGATGGAGATCGGATGGCCGACTAACGTGCGCCATGTTGCGCATGTCACATTTGATAGGTTCAATGGTTTCTTGGGTTTGCCTGACGAGTTCGAACCCGACGTGCCCAGAAGGCCTCCCAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACGGAATCCATGCAGTTATCATTTGACTCCAGAGGGAACAGTGTGCCAACAATTCTATTACTAATGCAAAAACGCCTGTATGCTGAAGGAGGGTTGCAGGCAGAGGGCATTTTCAGAATAAATGCAGAAAATAGTCAAGAGGAATTCGTTAGGGACCAATTAAATAGGGGAGTGGTCCCAGAAGGCATTGATGTACATTGTTTAGCAGGACTTATCAAGGCTTGGTTTAGGGAATTGCCCGTAGGCGTTCTGGATTCTTTATCACCCGAGCAAGTAATGAAATGCCAAACTGAAGAAGAATGTGCTGAACTAGCAAGGAATTTACCTCCTACTGAAGCTGCCCTCTTGGACTGGGCAATTAATCTGATGGCCGACGTTGTCCATCAGGAACATCTGAATAAGATGAATGCGCGCAACATTGCCATGGTTTTTGCACCAAACATGACTCAGATGGCAGATCCTTTGACTGCATTGATGTATGCTGTTCAAGTGATGAATTTCTTGAAGACACTTATATTAAGGACAGTGAGGGAAAGAGAGGATTCTGTGATAGAATCTTCACCTGGTTTTTATTTAGAGCCTTCTGATGATAACAGTCACCGTAGCCCTATACAGTCTGCAAAAGAAAATGAAGAGGCTCGAAACTTTGTAATCGAAAAAACTGTCTCAGAAAGTTCCCCTGCCCCCTACTCCCTCCAAGACAATAACTTAACTGGAGAAGAATCTGGCAATTTGGTAACCTCCTCTGAAAGTCCAGTATGTGACGAGGATTTGTATTGTGAGTATCCACCTAAAGGAGATGTTGGGAAGAATAAGACTGGTCAATCAAGCAATTCAAATTCAAGAAAGGGACCCCAAAAAACCAGAGGCCAGCAACCCATGATCCAAGGAAAGCCTGTTGTAAAAACCAAGGGAACTGGCAAACTCAGTCGCATAGATTCAAGATCAGAGAGGTCAGAACCATGGCGGTGA 1419 0.4574 MTEVLHSPSHFSSSSRRSTSSSSLSCTPLPSDGILFIQKAQTRSSSVAEEGCCPATCCDTEELKDGDKHKTEQLSLLALLVTSFRKSLIACKSERRELCAMEIGWPTNVRHVAHVTFDRFNGFLGLPDEFEPDVPRRPPSASATVFGVSTESMQLSFDSRGNSVPTILLLMQKRLYAEGGLQAEGIFRINAENSQEEFVRDQLNRGVVPEGIDVHCLAGLIKAWFRELPVGVLDSLSPEQVMKCQTEEECAELARNLPPTEAALLDWAINLMADVVHQEHLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLILRTVREREDSVIESSPGFYLEPSDDNSHRSPIQSAKENEEARNFVIEKTVSESSPAPYSLQDNNLTGEESGNLVTSSESPVCDEDLYCEYPPKGDVGKNKTGQSSNSNSRKGPQKTRGQQPMIQGKPVVKTKGTGKLSRIDSRSERSEPWR 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0650 472 MobiDBLite consensus disorder prediction 457 472 - -
Dere07g0650 472 Pfam P21-Rho-binding domain 102 130 IPR000095 -
Dere07g0650 472 SUPERFAMILY GTPase activation domain, GAP 143 322 IPR008936 -
Dere07g0650 472 MobiDBLite consensus disorder prediction 351 367 - -
Dere07g0650 472 SMART RhoGAP_3 162 325 IPR000198 GO:0007165
Dere07g0650 472 Gene3D Rho GTPase activation protein 136 332 IPR008936 -
Dere07g0650 472 MobiDBLite consensus disorder prediction 419 442 - -
Dere07g0650 472 CDD CRIB 101 144 - -
Dere07g0650 472 FunFam Rho GTPase-activating protein 5 133 326 - -
Dere07g0650 472 PANTHER MKIAA1688 PROTEIN 1 437 IPR044785 GO:0005096
Dere07g0650 472 MobiDBLite consensus disorder prediction 1 26 - -
Dere07g0650 472 ProSiteProfiles Rho GTPase-activating proteins domain profile. 148 333 IPR000198 GO:0007165
Dere07g0650 472 ProSiteProfiles CRIB domain profile. 103 116 IPR000095 -
Dere07g0650 472 SMART PBD_5 103 137 IPR000095 -
Dere07g0650 472 MobiDBLite consensus disorder prediction 333 472 - -
Dere07g0650 472 CDD RhoGAP 165 321 - -
Dere07g0650 472 Pfam RhoGAP domain 165 299 IPR000198 GO:0007165
Dere07g0650 472 MobiDBLite consensus disorder prediction 368 400 - -
Dere07g0650 472 Gene3D CRIB domain 100 133 IPR036936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0650 Dere-ChrDere07 9608472 9612147 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0914 08 12964844 12971487 Dere07g0650 07 9608472 9612147 CCT
Dere07g0650 07 9608472 9612147 Dere07g0650 07 9608472 9612147 ECH