Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0760 ATGGCGGCCGTTGCTTCTTTGTCTTTCTCAGCATTAACTCAATGCTCTGAAAGAAAAGCGACTGTGCCTTCGACTCGTTTCCTGAGCTCAAATTCCGACGCTTTTCGGCTGCGAATGAATTTTTCATATCATTGCGTAGGTGTTCGAGCTTCGAATTCGGCTCCGAAAATGGTTATTCAATGCATGTCTTCTGTGACAGACATTACCACTGTTTCTGAGACGAAGTTAAATTTCCTCAACGCATATAAGCGACCAATCCCTAGCATCTACAACACTGTGCTGCAGGAGCTCCTTGTCCAGCAACATTTAATGAGATACAAGAGATCATACCGCTATGACCCTGTATTTGCTCTTGGTTTTGTCACTGTATATGATCAGCTCATGGAAGGATATCCTAGCGATGAGGATCGAGATGCCATATTCAAAGCGTACATTGAGGCATTAAAAGAAGATCCAAACCAATACAGAATAGATGCACGGAAATTGGAAGAGTGGGCTCGGGCTCAAAATCCAACTTCCCTGGTTGAGTTTTCATCCAGAGAAGGAGAACTTGAGGGGATATTGAAGGACATTGCTGAAAGAGCAGGGGGAAAGGGGGAGTTTAGTTATAGTCGCTTCTTTGCAGTAGGCCTCTTTCGTCTCCTTGAATTGGTAAATGCAACAGAACCGACAATTTTGGAAAAGCTTTGTGCGGCTTTGAACATGAACAAAAAAAGTGTTGATCGGGATTTGGATGTGTATCGCAATCTGCTTTCCAAGTTGGTACAAGCAAAAGAGCTGTTAAAGGAATATGTTGACAGGGAGAAGAAGAAAAGGGAAGAAAGGGCTGAGTCACAAAAGGCTAATGAGGCAATCACAAAATGA 864 0.4317 MAAVASLSFSALTQCSERKATVPSTRFLSSNSDAFRLRMNFSYHCVGVRASNSAPKMVIQCMSSVTDITTVSETKLNFLNAYKRPIPSIYNTVLQELLVQQHLMRYKRSYRYDPVFALGFVTVYDQLMEGYPSDEDRDAIFKAYIEALKEDPNQYRIDARKLEEWARAQNPTSLVEFSSREGELEGILKDIAERAGGKGEFSYSRFFAVGLFRLLELVNATEPTILEKLCAALNMNKKSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAESQKANEAITK 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0760 287 Coils Coil 247 277 - -
Dere08g0760 287 Pfam Thylakoid formation protein 70 275 IPR017499 GO:0010207|GO:0015979
Dere08g0760 287 NCBIfam photosystem II biogenesis protein Psp29 66 272 IPR017499 GO:0010207|GO:0015979
Dere08g0760 287 Hamap Protein Thf1 [thf1]. 65 273 IPR017499 GO:0010207|GO:0015979
Dere08g0760 287 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 287 IPR017499 GO:0010207|GO:0015979
Dere08g0760 287 MobiDBLite consensus disorder prediction 268 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0760 Dere-ChrDere08 11362957 11366328 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0760 08 11362957 11366328 Dere07g0438 07 7158721 7162360 CCT
Dere08g0760 08 11362957 11366328 Dere08g0760 08 11362957 11366328 ECH