Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0735 ATGAAACAGAGACCTCCCCACCCCAAAATTATTTTTGTAGTACACCACTCCTCGTGCCCCAACACCAAACCCACTTTAATGGAACCAGTTCTAAGTCATAACAGTAGCAGCAGTTGCAATGGCAGAAGCAACAACAACGATGGCTATGATATCATTAGGTGGTTTGAAGATGTAACAGAGAAGGCAGGTTCTGTTCAGACCCAGGTGCTATCCCAGATTCTGAAGAACCATGGGGTGGAATATCTCAAGAAATGGTTGGGGGACTACAATATCCCCGACATGGATGCTTGTGCATTGGAATCTCTTTTCACTTCTGTGGTTCCCCTTGCCTCTCATGAAGATTTTGAACCTTATATTCAAAGGATTGCAGATGGGGACACTACTCCTGTACTAACTCTACAACCCATAACCACACTTTCCTTAAGTTCTGGAACCACGGAGGGAAGGCAAAAGTTCGTACCTTTCACCCGCCATAGCGCCCAAACTACTCTTCAAATTTTCACTTTAGCAGCAGCCTATAGATCAAGGGTTTATCCTATAAGAAAAGGAGGTAGGATTCTTGAATTCATATATAGCAGCAAACAGTTCCAAACAAAAGGAGGCTTAACAGTAGGAACGGCCACAACACACTATTATGCAAGCGAAGAGTTCAAAATTAAACAGGAGAAAACAAAGTCATTCACTTGCAGCCCTGATGATGTGATTTCAGGTGGAGACTATAAACAATCCACATACTGCCACCTCCTCCTTGGCCTCTTCTTCTTTGATCAAGTAGAGTATATCACCTCAGCCTTTGTCTATAGCATAGTGCAAGCCTTTCGCAGTTTTGAAGAGCTTTGGAGAGATATTTGCAGCGACATTAAAGATGGGGTTTTGAGCTCGAGAATCACAATACCCAAAATGAGAAAGGCTGTGTTGAATCTTATTTCCCCAAACCCATCTTTGGCTCTAAAACTAGAAGCTGCTTGCTTGGAGTTAGAAGAGGTGAATTGGTTTGGTCTGATTCCTAAGCTTTGGCCAAATGTTAAGTACGTATATTCCATAATGACGGGGTCTATGCAACCTTACTTGAACAAACTAAGGCATTATGCAAATGGGTTGCCATTAGTAAGTGCTGATTATGGCTCTACTGAGAGCTGGATAGGGGTTAATGTGGATCCTAGTTTGCCTCCAGAGAACGTAACATTTGCTGTAGTACCTACTTTCTCTTACTTCGAGTTCATACCCCTTCGTAGACAGAATAAAGATTGCACTTCAGTTGCTGATGATTTCATGGAAGATTTGCCAATCCCACTATCCCAAGTTAAGGTTGGACAAGAATATGAAATCGTCCTCACAACCTTCACTGGACTGTACAGGTGCAGACTAGGGGACGTGGTGGAAGTGGCGGGATTTCACAACGGTACCCCAAAGTTGAATTTCATATGCAGAAGAAAGCTAATTCTGACAGTCAACGTAGACAAGAACACAGAGAAGGACCTTCAGTTGGTAGTGGAAAGAGGGTCACGCCTACTGAACAAGGCGGAAGCAGAGGTGGTGGACTTCACCAGCTACGCAGACGTGTCCAACCAACCAGGACACTACGTCATATTCTGGGAGATCAAAGGCGACGTAGACGACAACCTGCTTCACACCTGCTGTACGGAGATGGATGCGTCCTTCGCCGACCATGGCTACGTCGTTTCCAGAAAGACCCATTCCATTGGGCCTCTTGAGCTCTGCGTCGTCGAGAGAGGCACCTTCAAGAAGATTCTGGATCACTTCGTCGCCAATGGGGCTGCTCTCAGCCAGTTCAAGATCCCCAGGTGCACTAACAACCAAGGCCTCCTCACTATCCTCACTGCTTCCACCCTCAAGACCTTTCGCAGCACTGCTTATGCTTGA 1884 0.4538 MKQRPPHPKIIFVVHHSSCPNTKPTLMEPVLSHNSSSSCNGRSNNNDGYDIIRWFEDVTEKAGSVQTQVLSQILKNHGVEYLKKWLGDYNIPDMDACALESLFTSVVPLASHEDFEPYIQRIADGDTTPVLTLQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQIFTLAAAYRSRVYPIRKGGRILEFIYSSKQFQTKGGLTVGTATTHYYASEEFKIKQEKTKSFTCSPDDVISGGDYKQSTYCHLLLGLFFFDQVEYITSAFVYSIVQAFRSFEELWRDICSDIKDGVLSSRITIPKMRKAVLNLISPNPSLALKLEAACLELEEVNWFGLIPKLWPNVKYVYSIMTGSMQPYLNKLRHYANGLPLVSADYGSTESWIGVNVDPSLPPENVTFAVVPTFSYFEFIPLRRQNKDCTSVADDFMEDLPIPLSQVKVGQEYEIVLTTFTGLYRCRLGDVVEVAGFHNGTPKLNFICRRKLILTVNVDKNTEKDLQLVVERGSRLLNKAEAEVVDFTSYADVSNQPGHYVIFWEIKGDVDDNLLHTCCTEMDASFADHGYVVSRKTHSIGPLELCVVERGTFKKILDHFVANGAALSQFKIPRCTNNQGLLTILTASTLKTFRSTAYA 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0735 627 Pfam GH3 auxin-responsive promoter 54 607 IPR004993 -
Dere08g0735 627 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 50 626 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0735 Dere-ChrDere08 11139433 11144840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0735 50 624 EF-hand Containing Proteins AT1G23160 35.533 3.74e-120 367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0735 08 11139433 11144840 Dere07g0402 07 6911451 6914698 CCT
Dere08g0735 08 11139433 11144840 Dere08g0735 08 11139433 11144840 ECH