Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0402 ATGCCCCAACCATCATTAATGGAGCCACTTCTCAGTTACAACAATGGCGGCAGCCATGGCTATGATATCATAAGCTGGTTTGACGAAGTAACCAAGAACGCTGGTTCTGTTCAGACTCAGATGCTATCCCAGATTCTGAAGCAGAACTCTCAAGTAGAATACCTCAAGAAATGGCTTGGGGATTACAGTATCCAAGACATGGATGATTGTGCATTGGAATCCCTTTTCAGTTCTGTGGTTCCTCTTGCCTCACATGAAGATTTTGAGCCCTTTATCCAAAGAATTGCAGATGGGGACACAGCCCCTTTACTCACTCAACAGCCCACAACCACTCTTTCCTTGAGTTCTGGAACCACAGATGGAAGGCAAAAGTTTGTACCTTTCACCCGCCATAGCGCGCAAACTACCCTCCAAATTTTCACTTTAGCGGCAGCCTATAGATCAAGGGTTTACCCCACAAGAGAAGGAGGAAGGATTCTCGAATTTATATACAGCAGCAAACAGTTCAAAACAAAAGGAGGCCTGACAGTAGGAACAGCCACAACACACTACTACACAAGCCCAGAGTTCAAGATCAAACAGGAGAACACGAAGTCGTTTACTTGCAGCCCAGACGAAGTAATCTCCGGAGGAGACTACAAACAAGTCACCTACTGCCACCTCCTTCTTGGCCTCTTCTATTCTGAGCAAATAGAGTTCATAACCTCAGCCTTTGTCTATAGCATAGTCCAAGCCTTTCGCAACTTCGAAGAGCTCTGGAGAGAAATATGTTGCGACATTAAAAGTGGTACACTGAGTTCGAGAATCAAGATACCCAGAATGAGAAATTCTGTTTTGAAGATTCTCTCTTATCCAAACCCATCTTTGGCTTCAAAGTTAGAAGCTAAATGCCAAGAACTAGAAACGGTGAATTGGTCTGGTTTGATTCCTAAGCTGTGGCCAAATGCGAAGTATGTGTATTCCATAATGACAGGGTCTATGGAGCCATATCTGAAAAAGCTAAGGCATTATGCAAATGGGTTGCCACTAGTGAGTGCTGATTATGGATCTACAGAGAGCTGGATAGGGGTTAATGTGGATCCTGGTTTGCTTCCTGAGAATGTGACATTTGCTGTAGTGCCCACTTTCGCTTACTTTGAGTTCATACCTCTTTACAGATCTCAGAAATTACAGGACTGTTGTTCGGTCAGTGATGATTTCATGGAAGATAAGCCAATCCCACTGTCCCAGGTTGAAGTTGGCCAAGAGTATGAAATAGTCCTCACAACATTCACAGGGCTATATAGGTGCAGATTAGGGGACGTAGTGGAAGTAGCTGGGTTTCACAACGGGACACCAAAGCTAAACTTCATATGCAGAAGGAAGCTAATCCTAACAGTAAACATAGACAAGAACACAGAGAAGGACCTCCAGCTAGTGGTAGAGAGAGGATCCCAGCTTCTAAACATGGCTCAAAACAAAGCAGAGCTGGTGGATTTTACAAGCTATGCTGACGTGTCGAACCAACCAGGACACTACGTAATATACTGGGAAGTCAAAGGTGAGGTGGAAGACGAGGTTCTTGAGGAGTGTTGTAGGGAGATGGACGAGGCTTTTGCGGACCATGGGTATGTGGTGTCTAGGAAGAGCAATTCGATAGGGCCTTTAGAGCTTTGCTTGGTGGAGAGAGGAACCTTCAAGAAGATTCTAGATTACTTCGTTGCAAATGGGGCTGCTTTGAGCCAGTTCAAGACCCCTAGGTGCACTAATAATCAGGTGCTTCTCAACATTCTAGACGCTTGCACCATTAAAAGTGTTCGCAGCTCTGCTTATATATAG 1818 0.4472 MPQPSLMEPLLSYNNGGSHGYDIISWFDEVTKNAGSVQTQMLSQILKQNSQVEYLKKWLGDYSIQDMDDCALESLFSSVVPLASHEDFEPFIQRIADGDTAPLLTQQPTTTLSLSSGTTDGRQKFVPFTRHSAQTTLQIFTLAAAYRSRVYPTREGGRILEFIYSSKQFKTKGGLTVGTATTHYYTSPEFKIKQENTKSFTCSPDEVISGGDYKQVTYCHLLLGLFYSEQIEFITSAFVYSIVQAFRNFEELWREICCDIKSGTLSSRIKIPRMRNSVLKILSYPNPSLASKLEAKCQELETVNWSGLIPKLWPNAKYVYSIMTGSMEPYLKKLRHYANGLPLVSADYGSTESWIGVNVDPGLLPENVTFAVVPTFAYFEFIPLYRSQKLQDCCSVSDDFMEDKPIPLSQVEVGQEYEIVLTTFTGLYRCRLGDVVEVAGFHNGTPKLNFICRRKLILTVNIDKNTEKDLQLVVERGSQLLNMAQNKAELVDFTSYADVSNQPGHYVIYWEVKGEVEDEVLEECCREMDEAFADHGYVVSRKSNSIGPLELCLVERGTFKKILDYFVANGAALSQFKTPRCTNNQVLLNILDACTIKSVRSSAYI 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0402 605 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 23 604 IPR004993 -
Dere07g0402 605 Pfam GH3 auxin-responsive promoter 26 585 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0402 Dere-ChrDere07 6911451 6914698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0402 22 602 EF-hand Containing Proteins AT1G23160 34.958 1.00e-122 373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0735 08 11139433 11144840 Dere07g0402 07 6911451 6914698 CCT
Dere07g0402 07 6911451 6914698 Dere07g0402 07 6911451 6914698 ECH