Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0585 ATGTGGAGAGATAGTGGAACTCCTGCTGATTCTTTCTACCAAGTCCGCCCCGAGTGTGCCGATGATGTCCCCAAAACTCGATTTAAGATCAAGGCTGGTAAAACACTAAGTGCAAGAAAATGGCATTCTGCATTTGATGCAGAAGGGCATCTGGATATAGGCAAGACTCTGAGCCGAGTCTACCGAGGGGGAATCCATCCATCAATTAGGGGAGAAGTTTGGGAATTTCTACTTGGCTGCTATGATCCAAAGAGTACATTTGATGAAAGAGAGCAGATAAGACAGCACCGAAGGACCCAATATGCTAAATGGAAGGAAGATTGCCGCCAATTGTTTCCACTTGTCGGAAGTGGTAGATTTATTACAGCACCTGTAATCACTGAAGATGGCCAACCAATTCAAGATCCATTGGTGCTGTTAGAAACAAATCCAGACAAGGGAGTGATTATACCTGCTCAAGATGGCATAAATGATCCAAGTAAAGGCAGTGCAAATAATTTAGAAAAGGTGACAGACAAGAAAGTAATCCAATGGATGTTAACTCTTCATCAAATAGGTCTTGATGTGGTTCGCACTGATAGGACACTGGTTTTTTATGAGAAACAAGAGAACCTTTCAAAACTATGGGATATTCTTGCTGTTTATGCTTGGATAGATGAAGACGTGGGTTATTGTCAAGGAATGAGTGACCTCTGCTCCCCTATGACAATTCTTCTCAATGATGAAGCTGATGCGTTTTGGTGCTTCGAGCGTCTGATGCGCAGATTGCGAGGAAATTTCAGATGCACTGATAACTCAGTTGGGGTGGAGGCTCAACTGAGTAACTTGGCTTCAGTTACTCAAGTCATTGATCCAAAACTTCATCAACATATAGAGACTCTTGGTGGAGGTGACTATCTGTTTGCTTTTCGGATGCTTATGGTTTTGTTTCGTCGAGAATTCTCCTTTTGTGACTCATTGTACCTTTGGGAGATGATGTGGGCTCTGGAATATGATCCCGACTTGTTCTTGATGTATGAGGAGCCTGAATCAGCATCTGAAAAAGCTGAGGGATCTACTAAAGGAAGAACAAAGTCAATACGTCAATGTGGCAAGTATGAGAGAGAAAATATGAAAAATGCAGCAAAGACTGCTAATGCTCCTCTTCCCATATCTGTTTTCCTAGTTGCCAGTGTGTTAAAAGATAAGAGCTCAAAACTGCTGCAGGAAGCACGTGGCTTGGATGACGTTGTCAAGATATTGAATGACATGACTGGAAATTTAGATGCCAAAAAAGCCTGCATTGGGGCAATGAAACTTCACAAAAAATATTTGAAAAAGGCCAATACCAATAAGTCATAG 1341 0.4191 MWRDSGTPADSFYQVRPECADDVPKTRFKIKAGKTLSARKWHSAFDAEGHLDIGKTLSRVYRGGIHPSIRGEVWEFLLGCYDPKSTFDEREQIRQHRRTQYAKWKEDCRQLFPLVGSGRFITAPVITEDGQPIQDPLVLLETNPDKGVIIPAQDGINDPSKGSANNLEKVTDKKVIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDILAVYAWIDEDVGYCQGMSDLCSPMTILLNDEADAFWCFERLMRRLRGNFRCTDNSVGVEAQLSNLASVTQVIDPKLHQHIETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFLMYEEPESASEKAEGSTKGRTKSIRQCGKYERENMKNAAKTANAPLPISVFLVASVLKDKSSKLLQEARGLDDVVKILNDMTGNLDAKKACIGAMKLHKKYLKKANTNKS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0585 446 ProSiteProfiles TBC/rab GAP domain profile. 64 330 IPR000195 -
Dere08g0585 446 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 268 437 IPR035969 -
Dere08g0585 446 FunFam TBC1 domain family member 15-like 162 260 - -
Dere08g0585 446 SMART tbc_4 61 353 IPR000195 -
Dere08g0585 446 Gene3D - 266 445 - -
Dere08g0585 446 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 35 415 - -
Dere08g0585 446 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 48 290 IPR035969 -
Dere08g0585 446 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 160 260 - -
Dere08g0585 446 Pfam Rab-GTPase-TBC domain 166 328 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0585 Dere-ChrDere08 8875266 8882614 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0585 08 8875266 8882614 Dere07g0163 07 3586260 3593939 CCT
Dere08g0585 08 8875266 8882614 Dere08g0585 08 8875266 8882614 ECH