Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0163 ATGTGGAGAGATAGTGGAGAACCAGCTGATTCTTACTATGAAGTCCGGCCTGAGTGTATCAATGATGTCCCCAAGACTCGATTTAAGATCAAGGCTGGTAAAACACTAAGTGTAAGGAAATGGCAGGCTGCATTTAATCCAGAAGGATATCTGGATATAGGCAAGACTCTTAGCCGAATCCAACGGGGGGGAATTCATCCATCAATTAGAGGAGAAGTTTGGGAATTTTTACTTGGTTGCTATGACCCAAATAGTTCATATGAGGAAAGAGATCAGATAAGACAGCGCCGAAGGGTGCAATATAATACATGGAAGGAAGTATGCCACCAATTGTTTCCTCTAGTTGGAAGCGGTAAATTTATTACAGCACCTGTAATCACTGAAGATGGTCAGCCCATTCAAGATCCATTAGTGCTGTTAGAAACAAATCCAGGACAGGGTGCAGTTGTACCTCCTCCAGATAATAAGGGGGCTAGTACAGATGCTGCAAATAATTTAGAAAAGGTGACAGACAAGAGAATAATTCAGTGGATGTTAACTCTTCATCAAATAGGCCTCGACGTGCTTCGCACTGATAGGACACTGGTTTTCTATGAGAAGAAAGAGAACTTATCAAAACTATGGGATATTCTTGCTGTTTATGCTTGGGTTGATACAGATGTTGGCTATTGTCAAGGAATGAGTGACCTATGCTCCCCTATGATAATGCTTCTGGATGATGAAGCTGATTCCTTTTGGTGCTTTGAACGTCTGATGCGCAGATTGCGAGGAAATTTCAGATGTACTGATAGCTCTGTTGGTGTGGAGGCACAACTGAGTAATTTGGCTTCAATTACTCAAGTCATTGATCCAAAACTTCATCAGCATTTGGAGCATCTTGGTGGAGGTGACTATCTGTTTGCTTTCCGGATGCTTATGGTTTTGTTTCGTCGAGAATTCTCCTTTTGTGACTCACTGTACCTTTGGGAGATGATGTGGGCTCTAGAATATGATCCTGACTTGTTCATGATGTATGAAGAGCCTGATTCAGATTCTGATAGGCCTGAAGAACTTAAACGAAAAGCAAAGTTGAAAAGTCAATGCGGGAAGTTTGAGAGAGAAAATTTGAAAGCAAGTAATTCTGAAGCTCCTCTTCCCATATCTGTTTTCCTTGTTGCCAGTGTGTTGAAAGATAAGAGCGCAAAACTACTGACAGAGGCTCGGGGCCTTGATGATGTTGTCAAGATACTAAATGACATGACTGGCAACCTAGATGCCAAGAAGGCTTGCACAGGGGCAATGAAACTGCACAAGAAATATTTGAAAAAGGTTCCCAAGCAGAGTAGTAGCACGGAGCATAGTTCTTGA 1347 0.4202 MWRDSGEPADSYYEVRPECINDVPKTRFKIKAGKTLSVRKWQAAFNPEGYLDIGKTLSRIQRGGIHPSIRGEVWEFLLGCYDPNSSYEERDQIRQRRRVQYNTWKEVCHQLFPLVGSGKFITAPVITEDGQPIQDPLVLLETNPGQGAVVPPPDNKGASTDAANNLEKVTDKRIIQWMLTLHQIGLDVLRTDRTLVFYEKKENLSKLWDILAVYAWVDTDVGYCQGMSDLCSPMIMLLDDEADSFWCFERLMRRLRGNFRCTDSSVGVEAQLSNLASITQVIDPKLHQHLEHLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFMMYEEPDSDSDRPEELKRKAKLKSQCGKFERENLKASNSEAPLPISVFLVASVLKDKSAKLLTEARGLDDVVKILNDMTGNLDAKKACTGAMKLHKKYLKKVPKQSSSTEHSS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0163 448 Pfam Rab-GTPase-TBC domain 166 327 IPR000195 -
Dere07g0163 448 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 159 259 - -
Dere07g0163 448 ProSiteProfiles TBC/rab GAP domain profile. 64 329 IPR000195 -
Dere07g0163 448 Gene3D - 265 446 - -
Dere07g0163 448 FunFam TBC1 domain family member 15-like 161 259 - -
Dere07g0163 448 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 267 433 IPR035969 -
Dere07g0163 448 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 38 411 - -
Dere07g0163 448 SMART tbc_4 61 352 IPR000195 -
Dere07g0163 448 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 40 289 IPR035969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0163 Dere-ChrDere07 3586260 3593939 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0585 08 8875266 8882614 Dere07g0163 07 3586260 3593939 CCT