Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0569 ATGAGAGAGACAGAGTGTGGAGGAGAGAGAAGGGGGCGAAAACACTTTTTTCTCTCTCCTCAGATCCCTACTGGGCTTTCAATTCCAGTGCCCGAAAAATCTGTCGTAATTGATTTTTCAATCGCTAATATCGGGCGATTTCAAGAATCGGTTATTTTTGGATTCGGCGTAGTTGCCATTTTTCTTCTCTTTGGTTTTGGGATGAGGAATGGTGATCAGAAACAACAGCAAGGAAACGGTGGTCGCTCGGGTCGAACCAACGGGTTTTTTCCCAGCTCATTCCGTGCTATCTCTAGTTACCTGAGGGTTGTTTCCTCCGGTGCTTCCAACGTTGCACGGTCTGCGGCATCAGTTGCATCCTCGATTGTGGATAGGGACGATGACGCCAATTCTGATCAGGTTATCTGGGCTGGGTTTGACAAATTAGAGGGTGAGGGAGAAGTCACACATCAAGTTCTGCTTCTAGGATTTCAGTCTGGCTTCCAGGTTTGGGATGTTGATGATTCACGTAATGTACACGACCTAGTTTCCAGACATGATGGCCCTGTTTCTTTTATGCAAATGCTACCAAATCCAATTGCATCAAAGAGACCAGCGGACAAGTTTGCAGACAGCCGCCCACTGTTGGTTGTCTGTGCTGATGGTTTCTTTGCTGGAGGCACTAACATTCAGGATGGGTTGGTCACCCCTTGCAATGGGGGCACTTCAAACTACCATGAGCAAGTGAATGGAAATTATCTGCCAACTACTGTTCAGTTTTATTCCTTGAGATCCCAATCATATGTTCATGCACTAAAGTTTAGATCAGTTGTTTATTCTGTAAGGTGCAGTTGTCGAGTAGTTGCGGTGTCTCAGTCAACTCAGATACACTGTTTTAATGCCACAACATTAGAAAGAGAATATACTATACTTACAAATCCTATAGTTGTAAGTTGTCCTGGTTCTGGAGGCATAGGCTATGGGCCACTTGCAGTGGGTCCGAGATGGCTGGCTTATAGTGGAAGCCCACTCCCAATATCCAATTCTGGGCATGTCAATCCACAACATTTGACACCTCCTGCAAGCTTTCCGGGTTTTTCTTCAAATGGGAGCTTGGTTGCATACTATGCCAAAGAATCAAGCAAGCAGCTTGCTTCTGGGATTGTGTCCCTTGGAGATATGGGGTACAAGAAACTTTCCAGATACTGCTCTGAGCTTCTAGCTGATAGCAATAGTTCTTTGCGATTGGCAAATTCAAATTGGAGGAACGGAACCATTAATGGACATTCAGCAGATGCAGACAACATTGGAATGGTCATTGTAAGGGATATTGTCAGTAAAAATGTAATTGCCCAACTGCAAGCCCACAAAAGTCCTATTTCAGCCTTATGCTTTGATCCTAGTGGTACCATTTTAGTGACTGCTTCAGTTCAGGGGCATAATATAAATGTTTATAAGATAATGCCTGGACACTCAGAGGCATCGGATGGTGGCGTCCATCTCTACAGGTTGCAGCGCGGCTTTACTAATGCGGTCATACAGGATATTAGTTTCAGCCATGACAGCAATTGGGTTATGATAAGTTCTTCTCGGGGCACTAGCCATCTATTTGCTATAAATCCTCAGGGAGGACCTGTGAATGTTCAGGCGCATGATTCTAGTTTTCCTGGTCAAAATAGTGGGTTGGGTATTATTACTAATCAAGCAGTTCTCTATCCTCATAATTTGCCCTCACTAATGCATAAACAGCAGACCCTGTGTGCAACGGGCCCACCAATCACACTTTCTGTTATTAGCAGAATTAGGAATGGAACTAATGGCTGGAGAGGCACTGTGAGTGGTGCTGCCGCAGCTGCAACAGGTAGGATGAGTTCCCTTCCTGGGGCAATTGCTTCATCTTTCCGTAGCTGCAAAGGCAATGTCATACCTGTTGATGGGAAGTATTCCAAGACAAAGTATCACCTATTGGTTTTTTCATCCTCTGGTTCTATGATACAATATGCTCTACGGATGTTAAACAGTCGAGATTCAGCAATTGTTTCTGGATTAAACCCTGCTTATGAATTAGCTCCACAGGCTGATGCAAGATTAGTAGTAGAAGCTATCCAGAAATGGAATATATGTCAGAGACTCAGTTTACGAGATCAAGAAGATAACATAGACATATATGGTGATAATGGAATTTCAGATGGCAACAAAATATATCCTGAGGAATTGAAAGAGGATGATATCGCTGGCCCAAAATTTAAGAATGAAGTTGTAAAAGCAAATTCCTGTTCCGAGGAAGAGCGTCATTTGTATATTTCCCAAGCTGAACTGCAGATGCACCCAGTTCAGACTCGATTGTGGGTAAAGCCTGTGATACATTTCCATTCAATGGTGAAAGAAGCTACCATGATGGATGAAGAAGCTGCTGCAGGAGGGGAAATTGAGATTGAAAGGATTCCAACTCGCATGATTCAAGCTGGGTCAAAATACTTAGTTCCTATTTCTGACTATATTCGGACCCCAAAATTCCAACAAACAAGGACTTCTGCTCTGGATAGCAAGATAAATGAACAATTGTTGCATCAGAGTGCTGGGATGTCTGAAAATGGCAAGATTTCTGCCAGGGGTATTTTGGGCTCTCCTGACTGTATGACAAATTCCGCTGGTGCTGTTACTGAATTTAGCAATGGCATTCATTTAACTGAGTGGGATGATCATCCGGTGCCGGCAAATGCAAAAGGCTTTGTAAATAAAAATAGCACACGCAAGCCAAATACTCGGCTTGAGATTGTAAATAATAGAAGAGAGCACTTAAACATGGAAGGTCAGCTCATGTTTGTAAATAATGACAGAGAAGGCCTGCTAATGGAGAATCACATTGAAGACAAATGGTGA 2862 0.4336 MRETECGGERRGRKHFFLSPQIPTGLSIPVPEKSVVIDFSIANIGRFQESVIFGFGVVAIFLLFGFGMRNGDQKQQQGNGGRSGRTNGFFPSSFRAISSYLRVVSSGASNVARSAASVASSIVDRDDDANSDQVIWAGFDKLEGEGEVTHQVLLLGFQSGFQVWDVDDSRNVHDLVSRHDGPVSFMQMLPNPIASKRPADKFADSRPLLVVCADGFFAGGTNIQDGLVTPCNGGTSNYHEQVNGNYLPTTVQFYSLRSQSYVHALKFRSVVYSVRCSCRVVAVSQSTQIHCFNATTLEREYTILTNPIVVSCPGSGGIGYGPLAVGPRWLAYSGSPLPISNSGHVNPQHLTPPASFPGFSSNGSLVAYYAKESSKQLASGIVSLGDMGYKKLSRYCSELLADSNSSLRLANSNWRNGTINGHSADADNIGMVIVRDIVSKNVIAQLQAHKSPISALCFDPSGTILVTASVQGHNINVYKIMPGHSEASDGGVHLYRLQRGFTNAVIQDISFSHDSNWVMISSSRGTSHLFAINPQGGPVNVQAHDSSFPGQNSGLGIITNQAVLYPHNLPSLMHKQQTLCATGPPITLSVISRIRNGTNGWRGTVSGAAAAATGRMSSLPGAIASSFRSCKGNVIPVDGKYSKTKYHLLVFSSSGSMIQYALRMLNSRDSAIVSGLNPAYELAPQADARLVVEAIQKWNICQRLSLRDQEDNIDIYGDNGISDGNKIYPEELKEDDIAGPKFKNEVVKANSCSEEERHLYISQAELQMHPVQTRLWVKPVIHFHSMVKEATMMDEEAAAGGEIEIERIPTRMIQAGSKYLVPISDYIRTPKFQQTRTSALDSKINEQLLHQSAGMSENGKISARGILGSPDCMTNSAGAVTEFSNGIHLTEWDDHPVPANAKGFVNKNSTRKPNTRLEIVNNRREHLNMEGQLMFVNNDREGLLMENHIEDKW 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0569 953 SUPERFAMILY WD40 repeat-like 151 533 IPR036322 GO:0005515
Dere08g0569 953 SMART WD40_4 490 531 IPR001680 GO:0005515
Dere08g0569 953 SMART WD40_4 258 293 IPR001680 GO:0005515
Dere08g0569 953 SMART WD40_4 439 479 IPR001680 GO:0005515
Dere08g0569 953 Pfam Breast carcinoma amplified sequence 3 583 822 IPR022175 -
Dere08g0569 953 Gene3D - 152 553 IPR015943 GO:0005515
Dere08g0569 953 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 76 918 IPR045142 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0569 Dere-ChrDere08 8706152 8712221 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0569 08 8706152 8712221 Dere07g0174 07 3773320 3779086 CCT
Dere08g0569 08 8706152 8712221 Dere08g0569 08 8706152 8712221 ECH