Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0174 ATGAGGAAGGGTGACCAGAAACAACATCAGGGAGGTGCAATTCCTCGGTCGGGGCGAGCTAATGGATTGTTTCCGAGCTCATTCCGCGCTATCTCAAGCTACCTGAGGATCGTTTCCTCTGGTGCTTCCACCGTTGCGCGTTCTGCAGCATCCGTTGCATCCTCGATTGTGGATAGGGATGGTGATGCCGACCATGATCAGGTTATCTGGGCTGGGTTTGACAAGTTAGAGAGGGAGGGAGATGTCATTCGGAAAGTTCTTCTTTTAGGCTATCGATCTGGGTTCCAGGTTTGGGATGTTGAAGATTCCAAAAATGTGCGTGACCTAGTTTCAAGAGATGATGGTCCTGTTTCTTTTATGCAAATGCTATCAAAGCCAATTGCATCTAAGAGACCAGAAGACAAGTTTGCAGACAGCCGGCCACTGTTGATTGTTTGTGCTGATGGAATTTTTGATGGAGGTGGTAACATTCAGGATGGTTTGGTCCCTCATTGCAATGGAAGTACTTTAAACTGCCATGACCAAGTGAATGGCACTTATCTGCCAACAACTGTTCAGTTTTATTCTTTGAGATCCCAATCATATGTTCATGAACTAAAGTTTAGATCGGCTATTTATTCTGTTAGGTGCAGTTCTCGTGTTGTCGCTGTTGCTCAATTTACTCAGATACACTGTTTCGATGCCACTACATTAGAAAGAGAATATACTTTACTTACCAATCCTATCGTCATGAGCTGTCCTGTTTCTGGAGGAATAGGCTATGGACCATTGTCGGTGGGTCCAAGATGGCTGGCTTACAGCGGAAGCCCAGTTGCAGTCTCTAATTCTGGGCGTGTCTATCCACAACATTTGACACCTTCTGCAAGCTTTCCTGGTTTTTCTTCAAATGGGAGCTTGGTTGCACACTATGCCAAAGAGTCCAGTAAACAACTAGCTGTGGGGATAGTGACCCTTGGAGATATAGGGTATAAGAAGCTTTCTAGATACTGTTCTGAGCTTCGGCCTGATAGCAATGGTTCTCCGCAATCTGTAAACTCTGGCTGGAAGGGCAATGGACTCAGTGATGGCTATTCGGCGGATATGGACAATGCTGGAATGGTCATTATCAGAGATATTGTCTCTAAAAGTGTTATTACTCAATTCCGGGCCCATAAAAGTCCTATTTCAGCCTTATGCTTCGATCCTAGTGGCATCATTTTAGTAACTGCTTCAGTTCAGGGGCATAATATAAATGTTTTTAAGATAATGCCTGGACACTCTGACAGTTTGTCGTCATCTGATGCTGGTCCTTCTTGTGTTCATATCTACAGGCTGCAACGTGGCTTTACAAATGCAGTAATCCAGGATATCAGTTTCAGTGATGACAGCAGCTGGATTATGATTAGTTCCTCAAAGGGTACTAGCCATCTGTTTGCCATAAATCCTTTGGGAGGATCTGTAAATATTCAGTCCCATGATGCATGTTTTACAGCAAAAAATGGTGTATTGGGTGTTATGATTGATCAGGCAGTTCGATGGCCTCCTAATTCAGGTTCACAAATGCCTAAACAACAGAGTCTGTGTGCAGCTGGTCCTCCAATCACACTTTCTGTTGTATGCAGAATTAGAAATGGAAATAATGGCTGGAGGGCCACCGTAAGTGGCGCAGCTGCAGCTGCGACAGGTAGAATGAGCTCTCTGTCTGGGGCTATTGCTTCATCGTTCTGTAACTGCAAAAGCAGTGCCATGTGTGTTGATGGGAACCGTTTTAAGGCAAAACATCACATGTTAATTTTTTCACCCACTGGTTCAATGATACAATATGCTCTGGGGACATCAAAGGGTCAAGGTTCAGTAGTTGTTTCTGGATCAACCCCTGCTTATGAATCTGCATTAGAGGTTGATGCAAGATTAGTTGTTGAGGCTATCCAGAAATGGAATATATGTCAGAGACACAATCGAAGAGAACGAGAAGATAATATTGACATATACGGTGAAAATGGAATTTCGGATAACAACAAAATATATCCTTTAGAAGTGAAGGATGAGAATATCAATAACCCAAAACTTGACAATGTAAAAGTAAATTCTCATCCTGTGGAAGAGCATCAATTGTATTTTTCAGAAGCAGAACTTCAGATGCGCCGAGTTGGGATTCCATTGTGGGCAAAACAGGAGATATATTTTCAGTCAATGGTAAAAGAGGAGAGCATAATGGGTGGAGAAACTGCTTCTGGAGGGGAAATTGAGATTGAAAGGATTCCAGCTCACATGATTGAAGCTAGGTCAAAAGACTTGGTCCCAATTTTTGACTATCTTCAGACTCAACGACAAACAAGGACAACAACTCTAGATAGTGAGGTAAACGAACAACAGTTGCATCAGACTTCCAAGATGTCTGAAAATGGCAGGATTTCACACACAAGTAACTCAGACTCCCCCGACTCTATGACTAATCTCGGTGGTGCTGAAGCTGAGTTAAACAGTAGCATCAGAGGAACAGAGTGTAATGATCATCTGATATTAGCAGAATCTAACGGCTTTGTAAATAAGAATGACAAGGACAATCTTGAGGCCAATACTTGCCGTGAGATTGTAAATAATAAAGAGCACTTAAACACGGAGGCTCAACTCATGCATTGGAATTGCTGCATTGATAGTCAGGTATGA 2649 0.4288 MRKGDQKQHQGGAIPRSGRANGLFPSSFRAISSYLRIVSSGASTVARSAASVASSIVDRDGDADHDQVIWAGFDKLEREGDVIRKVLLLGYRSGFQVWDVEDSKNVRDLVSRDDGPVSFMQMLSKPIASKRPEDKFADSRPLLIVCADGIFDGGGNIQDGLVPHCNGSTLNCHDQVNGTYLPTTVQFYSLRSQSYVHELKFRSAIYSVRCSSRVVAVAQFTQIHCFDATTLEREYTLLTNPIVMSCPVSGGIGYGPLSVGPRWLAYSGSPVAVSNSGRVYPQHLTPSASFPGFSSNGSLVAHYAKESSKQLAVGIVTLGDIGYKKLSRYCSELRPDSNGSPQSVNSGWKGNGLSDGYSADMDNAGMVIIRDIVSKSVITQFRAHKSPISALCFDPSGIILVTASVQGHNINVFKIMPGHSDSLSSSDAGPSCVHIYRLQRGFTNAVIQDISFSDDSSWIMISSSKGTSHLFAINPLGGSVNIQSHDACFTAKNGVLGVMIDQAVRWPPNSGSQMPKQQSLCAAGPPITLSVVCRIRNGNNGWRATVSGAAAAATGRMSSLSGAIASSFCNCKSSAMCVDGNRFKAKHHMLIFSPTGSMIQYALGTSKGQGSVVVSGSTPAYESALEVDARLVVEAIQKWNICQRHNRREREDNIDIYGENGISDNNKIYPLEVKDENINNPKLDNVKVNSHPVEEHQLYFSEAELQMRRVGIPLWAKQEIYFQSMVKEESIMGGETASGGEIEIERIPAHMIEARSKDLVPIFDYLQTQRQTRTTTLDSEVNEQQLHQTSKMSENGRISHTSNSDSPDSMTNLGGAEAELNSSIRGTECNDHLILAESNGFVNKNDKDNLEANTCREIVNNKEHLNTEAQLMHWNCCIDSQV 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0174 882 SUPERFAMILY WD40 repeat-like 86 474 IPR036322 GO:0005515
Dere07g0174 882 MobiDBLite consensus disorder prediction 1 20 - -
Dere07g0174 882 SMART WD40_4 192 227 IPR001680 GO:0005515
Dere07g0174 882 SMART WD40_4 429 472 IPR001680 GO:0005515
Dere07g0174 882 SMART WD40_4 374 414 IPR001680 GO:0005515
Dere07g0174 882 Pfam Breast carcinoma amplified sequence 3 524 761 IPR022175 -
Dere07g0174 882 Pfam WD domain, G-beta repeat 431 469 IPR001680 GO:0005515
Dere07g0174 882 Pfam WD domain, G-beta repeat 378 407 IPR001680 GO:0005515
Dere07g0174 882 MobiDBLite consensus disorder prediction 775 814 - -
Dere07g0174 882 FunFam Breast carcinoma-amplified sequence 3 293 524 - -
Dere07g0174 882 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 15 836 IPR045142 GO:0006914
Dere07g0174 882 Gene3D - 84 510 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0174 Dere-ChrDere07 3773320 3779086 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0569 08 8706152 8712221 Dere07g0174 07 3773320 3779086 CCT
Dere07g0174 07 3773320 3779086 Dere07g0174 07 3773320 3779086 ECH