Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0566 ATGCCAAGTTCAAGAAACTCCCATTCTGTTAGTTTGCTGAATGTCATCATATATTGTAACCCACACAAAGGAGTGGTCCATCATCATCTGAAGCTTCAGTGCACGGCGAAAAATGCATTGGATACAGCAAAGGCCTCTATTTTGATGATGATGATGATGAAGAAGAATCAGAAAGGATTAATGGAGGGACAACAAGTGCTCAAAAAGTCCAAGGTTGTAAAAATAAGCTCACGAGAATCCTGGGAGTACAGCATCACTCATGCTACCAACCATGGCTACCCTATTATGGTCCATTTCTCTGCTAGTTGGTGCATGCCCTCTATAGCTATTAGCCCTTTCTTTGAAGAAATGGCCACCACCTATCAAGATATTAGGTTTCTGGTAGTGGATGTAGATGAGGTTAAGGAAGTAGCCTCCAAGTTGGGAATCAAAGCGATGCCTACTTTTGTGTTGGTGAGTGGAGGAACTCCAGTGGATAGAATTGTGGGTGTCAATCCTTATGAGATTAGAAAAATGATCGATGCTTTTATTCACTCAATGAGTTTCAACAAATCCATATGA 561 0.4118 MPSSRNSHSVSLLNVIIYCNPHKGVVHHHLKLQCTAKNALDTAKASILMMMMMKKNQKGLMEGQQVLKKSKVVKISSRESWEYSITHATNHGYPIMVHFSASWCMPSIAISPFFEEMATTYQDIRFLVVDVDEVKEVASKLGIKAMPTFVLVSGGTPVDRIVGVNPYEIRKMIDAFIHSMSFNKSI 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0566 186 Gene3D Glutaredoxin 49 183 - -
Dere08g0566 186 Pfam Thioredoxin 76 174 IPR013766 -
Dere08g0566 186 CDD TRX_family 94 174 - -
Dere08g0566 186 FunFam Thioredoxin 69 178 - -
Dere08g0566 186 PANTHER THIOREDOXIN 72 174 - -
Dere08g0566 186 ProSiteProfiles Thioredoxin domain profile. 60 178 IPR013766 -
Dere08g0566 186 SUPERFAMILY Thioredoxin-like 64 177 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0566 Dere-ChrDere08 8687693 8690135 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0566 08 8687693 8690135 Dere07g0178 07 3804856 3806824 CCT
Dere08g0566 08 8687693 8690135 Dere08g0566 08 8687693 8690135 ECH