Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0178 ATGGAGGGCCAAGAACAGCTCAGGAAGTCTAAGGTTATCAAAATAGACTCAAAGCCTTCATGGGACACCCACATCTCTAATGCTTCCAATCAATCCCTCCCTGTTATGGTTCATTTTTCTGCATCCTGGTGCATGCCTTCTGTGTTTATGAACCCTTTCTTTGAAGAACTGGCTTCTACCCATCAGAATATGGTGTTTCTCATGGTGGATGTTGATGAGGTTAAGGAAGTAGCATGGAAGATGGGAATAAAAGCAATGCCAACATTTGTGTTGCTAAGTGGAGGAAGTGTAGTGCACAAAATTGTGGGAGCTAATCCTCATGAAATCAGGAAAAGACTCGGTGCTTTTCTTCATTCAACTCCTCCTCACAACTTTCTCTGA 381 0.4278 MEGQEQLRKSKVIKIDSKPSWDTHISNASNQSLPVMVHFSASWCMPSVFMNPFFEELASTHQNMVFLMVDVDEVKEVAWKMGIKAMPTFVLLSGGSVVHKIVGANPHEIRKRLGAFLHSTPPHNFL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0178 126 Gene3D Glutaredoxin 1 123 - -
Dere07g0178 126 Pfam Thioredoxin 17 111 IPR013766 -
Dere07g0178 126 CDD TRX_family 20 113 - -
Dere07g0178 126 ProSiteProfiles Thioredoxin domain profile. 1 118 IPR013766 -
Dere07g0178 126 PANTHER THIOREDOXIN 12 112 - -
Dere07g0178 126 SUPERFAMILY Thioredoxin-like 7 117 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0178 Dere-ChrDere07 3804856 3806824 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0566 08 8687693 8690135 Dere07g0178 07 3804856 3806824 CCT
Dere07g0178 07 3804856 3806824 Dere07g0178 07 3804856 3806824 ECH