Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0950 ATGGAAAATGAAAAAAATGAGGTCATTGTTGTTGATAACTTCTTCACTGGTTCCAAAGACAACCTTAGAAAATGGATTGGTCATCCAAGATTTGAGCTAATCCGTCACGATGTGACGGAGCAATTATTGATTGAGGTTGATCAGATCTACCATCTTGCTTGCCCTGCTTCTCCGATTTTCTACAAGTACAATCCTGTAAAGACAATAAAGACAAATGTTATCGGAACGTTGAACATGCTTGGCCTTGCAAAGCGAGTGGGAGCACGTATTTTGCTTACATCTACTTCCGAGGTATATGGGGATCCTCTTGTGCACCCACAACCAGAAAGCTACTGGGGCAATGTTAACCCTATTGGAGTTCGGAGTTGCTATGATGAGGGGAAGCGTGTGGCAGAAACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGAATTGCTAGAATCTTTAACACATATGGACCACGCATGAATATTGATGATGGGCGTGTTGTCAGCAACTTTATTGCCCAAGCACTTCGTGGTGAACCCCTGACTGTCCAACTTCCAGGCACCCAAACTCGCAGTTTCTGCTATGTCTCTGACATGGTTGATGGTCTTATCCGTCTCATGGACGGGCAAAACACTGGCCCAATCAACCTTGGAAATCCAGGTGAATTTACAATGACCGAGCTTGCTGAGACGGTGAAGGAGCTTATTAATCCAGCTGTGGAGATAAAGATGGTAGAGAACACTCCTGATGACCCTCGACAGAGAAAACCAGACATAACAAATGCAAAAGAATTGTTGGGTTGGGAACCAAAGGTCAAGCTGCGAGATGGCCTTCCTCTTATGGAAGAAGATTTCCGTCTCAGGCTTGGGGTTGAAAAGAAGTGA 882 0.441 MENEKNEVIVVDNFFTGSKDNLRKWIGHPRFELIRHDVTEQLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQLPGTQTRSFCYVSDMVDGLIRLMDGQNTGPINLGNPGEFTMTELAETVKELINPAVEIKMVENTPDDPRQRKPDITNAKELLGWEPKVKLRDGLPLMEEDFRLRLGVEKK 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0950 293 Pfam GDP-mannose 4,6 dehydratase 12 278 IPR016040 -
Dere07g0950 293 Gene3D - 1 287 - -
Dere07g0950 293 FunFam UDP-glucuronic acid decarboxylase 6 1 289 - -
Dere07g0950 293 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 285 IPR036291 -
Dere07g0950 293 CDD UGD_SDR_e 3 285 - -
Dere07g0950 293 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 289 IPR044516 GO:0042732|GO:0048040|GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0950 Dere-ChrDere07 13047550 13050380 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0950 43 277 Miscellaneous Gene Families AT4G00110 25.097 2.35e-13 68.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1185 08 16019233 16022093 Dere07g0950 07 13047550 13050380 CCT