Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0914 ATGGACTCTCTCACTGTACTCTATATCTTTCTAGCATCCTACTTCTGCTTCTTCATCTGGAAATTCTTCGACCAGAGGAAAGACCAAGAATGCTACATCCTGGACTACCAATGCTACAAGCCCACCGACGATCGCATGCTCTCCACCGAGTTCTGCGGTAGAGTCATCAAGCGAACCGAAAACCTAGGCCTCGGCGAGTACAAGTTCCTCCTCAAAGCCATCGTCAGCTCCGGCATCGGCGAGCAAACTTACGCCCCAAGAAACGTCTTCTCCGGCCGAGAGGCCTCACCCACTCTTGCCGACGGCATCTCCGAGATGGAGGAGTTCTTCCACGACAGCATCGCCAAACTCCTCGCCAGGTCAGCCATTTCCCCCTCCGACATCGACATCCTCGTCGTTAACATCTCAATGTTTGCTTCCCTTCCCTCCTTGTCCTCTCGAATCATTAACCATTACAAATTGAGAGAGGACATTAAGGTTTACAATCTCACCGGCATGGGGTGTAGCGCTAGCCTTATTTCTCTAGACATTATCAAGAACATTTTCAAGACTCAGAAGAACAAGTACGCGCTTCTGGTCACTTCCGAGTCTCTGAGTCCAAATTGGTATTCTGGGAACGACAAATCCATGGTTTTAGCCAATTGCTTGTTTCGCTCTGGAGGGTGTGCTATCTTATTGACTAACAAAAGGTCCTTAAAGCATAAGGTCATGTTGAAGTTAAAATGTCTTGTTAGAACCCATCATGGAGCCAGAGAAGAAGCTTATAACTGCTGTATCCAGAAGGAAGATGACCAAGGAAGGCTAGGGTTTCACCTTGGGAAGACACTCCCAAAGGCAGCCACGAGGGCATTTGTTGATAACTTGAGGGTAATTTCACCTAAGATTTTGCCCATGAGGGAGTTACTAAGGTTTATGGTTGTGTCCTTAGTCAAAAAGCTCAACATTATGGGTAATTCCACCAAGTCCTCAAGCAGTGGAACAAAGTCCCCATTGAATTTCAAAACAGGGGTCGATCATTTTTGCATACACACAGGAGGAAAAGCTGTGATTGATGGGATTGGGATGAGCTTGGATCTGACTGAGTACGATCTTGAGCCAGCGAGGATGACACTGCACCGTTTTGGGAACACTTCTGCTAGTAGTCTGTGGTATGTGTTGGCGTATATGGAGGCGAAGAAGAGGCTGAAGAAAGGTGACACAGTGTTGATGATAAGTTTTGGTGCTGGCTTTAAATGTAACAGCTGTTTGTGGGAGGTAGTGAGAGATGCGGGAAACAGGAATGTGTGGGACGACTGTATTGATGACTATCCACCAGAGAGTTTGGCGAACCCTTTCATGGAGAAGTATAGTTGGATCAATGACCTTGAGGTGGAGGATCTACCCAACGTGCAAATTCCAGATTTTCTCAAGTAA 1413 0.4685 MDSLTVLYIFLASYFCFFIWKFFDQRKDQECYILDYQCYKPTDDRMLSTEFCGRVIKRTENLGLGEYKFLLKAIVSSGIGEQTYAPRNVFSGREASPTLADGISEMEEFFHDSIAKLLARSAISPSDIDILVVNISMFASLPSLSSRIINHYKLREDIKVYNLTGMGCSASLISLDIIKNIFKTQKNKYALLVTSESLSPNWYSGNDKSMVLANCLFRSGGCAILLTNKRSLKHKVMLKLKCLVRTHHGAREEAYNCCIQKEDDQGRLGFHLGKTLPKAATRAFVDNLRVISPKILPMRELLRFMVVSLVKKLNIMGNSTKSSSSGTKSPLNFKTGVDHFCIHTGGKAVIDGIGMSLDLTEYDLEPARMTLHRFGNTSASSLWYVLAYMEAKKRLKKGDTVLMISFGAGFKCNSCLWEVVRDAGNRNVWDDCIDDYPPESLANPFMEKYSWINDLEVEDLPNVQIPDFLK 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0914 470 PANTHER 3-KETOACYL-COA SYNTHASE 13 438 IPR012392 GO:0006633|GO:0016020|GO:0016747
Dere07g0914 470 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Dere07g0914 470 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 451 IPR012392 GO:0006633|GO:0016020|GO:0016747
Dere07g0914 470 Gene3D - 72 419 IPR016039 GO:0016746
Dere07g0914 470 SUPERFAMILY Thiolase-like 243 420 IPR016039 GO:0016746
Dere07g0914 470 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 337 418 IPR013747 -
Dere07g0914 470 CDD CHS_like 18 417 - -
Dere07g0914 470 SUPERFAMILY Thiolase-like 17 231 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0914 Dere-ChrDere07 12699689 12701101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0914 19 467 Acyl Lipid Metabolism Gene Families AT2G28630 72.926 0.0 699
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1159 08 15589165 15590583 Dere07g0914 07 12699689 12701101 CCT