Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0827 ATGCCGTCCAATTCGGGTTCTTCTCACTCCGACCATGACATTGGCCCTCAGCCTCAATCGATCGAAGAACAATTGGCTTCAGTCACATTGAACCCCTCCGATGGTGAACCATCTGCGCATGAAGAAACAAACGGCGTCGCCCTTGAGTACGTCAATCAGGATACTCAGATTGTAATGGATGAACAGGTTCAGTGCAGTTCAGGTGCTGCTGATGATGATATTCGAGAGTTTGTGGAGTCTTCCGACCACGGTATCGTATGGGGGAGGACCGGTTCGGAGCTTGAGGAGGATGCGCCGTCCAGCCCTAGTAGTAGCGGGTATGCTGGTGAAAGGGGCAGTAGCAGTGCGACTAGTGGGTCGTTGATTGACGATGCTGTTGAACAGGATGAAATAGAGGCGATGAGGAATGATGTTACAGTCGACGAAATCTCTGATCCCCACACGTCCTGGCTTCCTGGGAAACGACATGTAGACGAGGATGATGCTTCTATATCATGGAGGAAAAGGAAGAAGCATTTTTTTGTTCTGAGCAATTCTGGCAAACCAATATATTCGAGATATGGAGACGAACACAAGCTTGCAGGATTCTCAGCTACTTTGCAAGCAATAATTTCCTTTGTGGAGAACGGGGGTGACCGTGTCAAATTGTTGAGGGCTGGAAAGCATCAGGTGGTTTTTCTTGTGAAAGGACCAATTTACCTAGTTTGCATCAGCTGCACAGAAGAACCTTATGAGTCATTAAAAGGACAATTGGAGCTGATTTATGATCAGATGCTTGTTATATTAACAAAGTCAGTGAACAGATGTTTCCAGAAGAATCCCAAGTTTGACATGACACCACTGCTTGGAGGAACTGACATTGTCTTCTCATCTCTAATACATTCTTTCAATTGGAATCCAGCTACATTTCTTCATGCCTATACTTGTCTTCCTCTTGCATATGCTACAAGACAAGCTGCAGGTGCTATCTTGCAAGACGTTGCTGATTCAGGTGTTTTGTTTGCAATACTGATGAGCAGGCACAAGGTAGTCAGTCTTGTTGGTGCTCAGAAAGCTTCTCTACATCCAGACGATATGCTGCTGCTTGCCAATTTTGTAATGTCCTCAGAATCCTTTAGGATGTCAGAATCATTTTCTCCAGTTTGCTTGCCAAGATATAATCCTTTTGCATTTTTGTATGCTTATATCCATTATTTTGATGCTGACACATACTTGATGTTGCTAACCACTAGTTCAGATGCCTTTTATCATCTTAAGGATTGCAGGATTCGTATCGAAACAGTCCTTTTGAAGTCAAATGTCCTTAGTGAAGTTCAGAGATCATTGCTGGACGGTGGTATGCACATTGAGGATCTGCTTGTCGACCCATTAACCCGTTCTGAATCATCTCCTCATTTGGGCCATCACAGGCCTCCAACAGATTCTCTTGAAAGATTGAAGGAACCTTATTTTGGTGTTGGTGGTCCCGCCGGGTTGTGGCATTTCATATATCGCAGTATATATCTGGATCAATATGTTTCTTCAGAGTTCTCTTCTCCGATTAATAGTCCTCGACAGCAGAAAAGACTGTATAGAGCTTACCAGAAACTGTTTGCATCCATGCATGATAAAGGAGTTGGGCCACACAAAACTCAATTTAGAAGAGATGAAAACTACGCTCTTCTCTGTTGGGTGACACAGGATTTTGAGCTTTATGCAGCCTTTGATCCCCTAGCAGACAAGGCCTTGGCAATAAAGACTTGCAACCGGGTTTGTCAATGGGTGAAAGATGTCGAGAACGAGATATTTTTGCTAGGTTCTAGCCCCTTCTCATGGTGA 1818 0.4417 MPSNSGSSHSDHDIGPQPQSIEEQLASVTLNPSDGEPSAHEETNGVALEYVNQDTQIVMDEQVQCSSGAADDDIREFVESSDHGIVWGRTGSELEEDAPSSPSSSGYAGERGSSSATSGSLIDDAVEQDEIEAMRNDVTVDEISDPHTSWLPGKRHVDEDDASISWRKRKKHFFVLSNSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDRVKLLRAGKHQVVFLVKGPIYLVCISCTEEPYESLKGQLELIYDQMLVILTKSVNRCFQKNPKFDMTPLLGGTDIVFSSLIHSFNWNPATFLHAYTCLPLAYATRQAAGAILQDVADSGVLFAILMSRHKVVSLVGAQKASLHPDDMLLLANFVMSSESFRMSESFSPVCLPRYNPFAFLYAYIHYFDADTYLMLLTTSSDAFYHLKDCRIRIETVLLKSNVLSEVQRSLLDGGMHIEDLLVDPLTRSESSPHLGHHRPPTDSLERLKEPYFGVGGPAGLWHFIYRSIYLDQYVSSEFSSPINSPRQQKRLYRAYQKLFASMHDKGVGPHKTQFRRDENYALLCWVTQDFELYAAFDPLADKALAIKTCNRVCQWVKDVENEIFLLGSSPFSW 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0827 605 MobiDBLite consensus disorder prediction 1 53 - -
Dere07g0827 605 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 223 237 IPR004353 GO:0006623
Dere07g0827 605 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 327 340 IPR004353 GO:0006623
Dere07g0827 605 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 376 399 IPR004353 GO:0006623
Dere07g0827 605 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 189 209 IPR004353 GO:0006623
Dere07g0827 605 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 351 367 IPR004353 GO:0006623
Dere07g0827 605 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 583 603 IPR004353 GO:0006623
Dere07g0827 605 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 570 583 IPR004353 GO:0006623
Dere07g0827 605 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 274 286 IPR004353 GO:0006623
Dere07g0827 605 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 303 324 IPR004353 GO:0006623
Dere07g0827 605 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 404 430 IPR004353 GO:0006623
Dere07g0827 605 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 554 568 IPR004353 GO:0006623
Dere07g0827 605 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 171 188 IPR004353 GO:0006623
Dere07g0827 605 MobiDBLite consensus disorder prediction 1 38 - -
Dere07g0827 605 Pfam Third Longin domain of FUZ, MON1 and HPS1 491 591 IPR043970 GO:0016192
Dere07g0827 605 Pfam First Longin domain of FUZ, MON1 and HPS1 171 291 IPR043972 GO:0016192
Dere07g0827 605 Pfam Second Longin domain of FUZ, MON1 and HPS1 332 423 IPR043971 GO:0016192
Dere07g0827 605 PANTHER SAND PROTEIN-RELATED 45 603 IPR004353 GO:0006623
Dere07g0827 605 MobiDBLite consensus disorder prediction 90 121 - -
Dere07g0827 605 MobiDBLite consensus disorder prediction 96 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0827 Dere-ChrDere07 11775428 11781909 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1077 08 14762980 14775567 Dere07g0827 07 11775428 11781909 CCT