Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0678 ATGGAGTTGGGAAGTGTGCAACAATTTCTCAATGGAAAGACCATTTTGGTGACTGGTGCATCAGGCTTCTTAGCAAAGGTTTTTGTGGAAAAGTTATTAAGGGTTCAATCAGATTTGAAGAAATTGTATCTTCTTGTAAGAGCTTCTGATACTAATGCAGCCACACAACGCCTGCACAATGAGATCATAAGGAAGGAATTGTTTGGGGTTCTACGAGACAAGTGGGGTGCAGATTTTGAATGTTTCATATCAGAGAAGATAGCTGCCATTGCAGGAGATGTCTCTCTTGTGAACTTGGGACTAAAAGATGCAATTCTTGAAAAGATGTGCAACGAAATAGACGTTGTTGTGAACTTTGCTGCAACTACCAATTTTGACGAAAGATTTGACATTGCAATGGGTGTTAACACAATGGGTGCTTTAAATGTCTTAAATTTCACTAAGAGCTGTCATAAAACACAGGTCTTTCTCCACGTGTCAACTGCTTATGTGTGTGGGGAGGCTAAGGAAGGAGAAGTAATAAAAGAAGAACCTTTTCAAATGGGTCAAACCCTAAATGGGCCTTCCATATTAGACATTCACCAAGAAAAGATTTTGATGCAGAAGAGAATAGATGAACTTCAATCGCAAAATATTGGCAATGAAAAGGCTATAACATCTGCAATGAAAGATTATGGAATTCAGAGAGCAAACTTGTATGGATGGCCAAACACTTACGTATTTACAAAAGCAATGGGAGAGATGCTTGTGTCACATTTTAAGCAAAACATGCCCTTAATTATCATACGCCCCTCCATGATAACAAGTACATACAAGGAACCCATCCCTGGTTGGATCGAAGGTTTGAGAACACTTGATAGTGTAATCGGTAGCTATGGCAAAGGAAAAATAACATGCTTTCTTGGTCATCCCAAGACAATTTTAGATGTGATACCTGCGGACATGGTGATAAACTGTATAATGGCAGCAATGGTGATTCACTCAAATGATGTGTCAGAGAAATTCATATACCATGTTGGTTCATCATCAAGAAATCCTCTCAGAATTTATTATGTTTGCAATCTTTCGTATCTTTATTTCATAAACAATCCCTGCACCAACGAAAGTGGAAAGCCAATAATCATCTCCAAGTTGAAATTTTTTACAAGTATGGCTAGTTTTCATACACGTATGATGATCCGATATGTGTTGCCGCTAAAGGTATTAAAATTGGTGAACGAAGTGTTTTGCCGAATCACCCAAGACTTCTACACCCGAAACGACAGAAAAGTGAAAATGGTGATACGAATGGCTGAACTTTACAAACCCTACGTGTTTTTTAAGGCTGTCTTTGATGACACGAATACAGAAAAATTACGGATAGCAACGAAGATGGAGGATGCTGGGCTTGAGTTTGACTTTGATCCCAAGAGCATCGATTGGACAGATTATTTGTTGAATGCACACATTCCTGGCCTCGTCAAGTATGTATTAAATCCATCCCTCGAATAA 1491 0.387 MELGSVQQFLNGKTILVTGASGFLAKVFVEKLLRVQSDLKKLYLLVRASDTNAATQRLHNEIIRKELFGVLRDKWGADFECFISEKIAAIAGDVSLVNLGLKDAILEKMCNEIDVVVNFAATTNFDERFDIAMGVNTMGALNVLNFTKSCHKTQVFLHVSTAYVCGEAKEGEVIKEEPFQMGQTLNGPSILDIHQEKILMQKRIDELQSQNIGNEKAITSAMKDYGIQRANLYGWPNTYVFTKAMGEMLVSHFKQNMPLIIIRPSMITSTYKEPIPGWIEGLRTLDSVIGSYGKGKITCFLGHPKTILDVIPADMVINCIMAAMVIHSNDVSEKFIYHVGSSSRNPLRIYYVCNLSYLYFINNPCTNESGKPIIISKLKFFTSMASFHTRMMIRYVLPLKVLKLVNEVFCRITQDFYTRNDRKVKMVIRMAELYKPYVFFKAVFDDTNTEKLRIATKMEDAGLEFDFDPKSIDWTDYLLNAHIPGLVKYVLNPSLE 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0678 496 CDD FAR-N_SDR_e 13 364 - -
Dere07g0678 496 Gene3D - 5 366 - -
Dere07g0678 496 Pfam Male sterility protein 17 320 IPR013120 -
Dere07g0678 496 Pfam Male sterility protein 395 492 IPR033640 -
Dere07g0678 496 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 329 IPR036291 -
Dere07g0678 496 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 492 IPR026055 GO:0080019
Dere07g0678 496 CDD FAR_C 393 491 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0678 Dere-ChrDere07 9955862 9966448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0678 1 444 Acyl Lipid Metabolism Gene Families AT3G44560 52.125 3.57e-152 440
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0948 08 13369397 13372596 Dere07g0678 07 9955862 9966448 CCT