Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0569 ATGAACCAAGTACCCTTCTCTCTCTCAGGTCTTGATTCCTGCGCATTCCCTCAGGTCGCCATGGATTGTCGCATCTATGGCGTCACCAAGCTCCGCATCTATCTTCTCCTTCTTCTCTCCGGCTTCCCCCTTCTCGCATTCTCGGATTCTCCAAATCCCAGATTGTCGATCTCCTCCTCTTCTTCTTCTTCATCGGTTCAAATAAACTCCAACTCGGTTCTGGTGGCTCTTCTAGACTCGCATTATACGGAACTCGCTGAGCTGGTGGAGAAGGCTATGCTGTTGCAGACTCTCGAGGACACTGTCGGTGCCCACAACATCACCATCTTCGCACCCAGAAACGAAGCCCTCGAGCGCGATCTCGACCCAGAGTTCAAGCGCTTCCTTCTCGAACCAGGTAATCTCAAGTCTCTTCAGTCCTTGCTCACGTTTCATATCATCCCGACCCGAATCGGATCGGAGACATTCCCCGCTCAAACCGGGTCAACCCGTCACGAAACGCTTTCGAAGTCGGAGTTTCTTCACCTTGCAAATAATGGCACCGGGGAATGGACAGTAGATCGCGCCAAGATTATCCACCCGAGCGTAGTAACCCGACCCGACGGAGTGATCCACGGGATTGAGCGCCTCCTGATCCCTCGTTCCGTCCAAGATGACTTCAACCGCCGGCGAAGTCTTCAGTCCATCACAGCGGTGAAGCCCGAGGGAGCACCGGAGGTTGACCCGAGGACGCATCGGCTCAAGAAGCCGGCTCCGCCAGTTAAACCCGGTTCGCCGCCGGTTTTACCCATCTATGACGCCATGGCTCCGGGACCCGCTCTGGCGCCTGCCCCTGCACCTGGGCCCGGTGGGCATCACCACCATTTCAACGGCGAAGCACAGGTCAAGGATTTCATTCAGACGCTGCTCCATTACGGAGGGTACAACGAAATGGCCGACATTCTGGTGAATCTGACATCTTTAGCAACGGAAATGGGTCGTTTAGTGTCGGAGGGTTATGTCCTAACGGTTTTGGCTCCGAATGATGAAGCCATGGCTAAACTAACCACGGACCAGTTGAGCGAACCGGGTGCACCGGAACAGATAATGTATTACCATCTAATACCCGAGTACCAAACCGAAGAAAGTATGTACAATGCGGTTCGACGGTTCGGTAAGGTCCGGTACGATACTCTACGGTTACCGCATAAGGTTGTGGCTCAGGAGGCAGATGGGTCGGTCAAGTTCGGGCAGGGAGACGGGTCAGCTTTTTTGTTTGACCCGGATATATACACGGATGGTCGGATCTCTGTGCAGGGTATTGACGGGGTTTTGTTCCCACCGGAGGAAGAGGAGAAACCGATGACCCGGACGGTTCAACCCGCCAAGGTCGTGGTCAAGTATAGAAGAGGGAAATTGCTGGAAGCAGCGTGCTGGATGCTTGGAACCTTTGGACAGGACTCTAGATTCACCACTTGCCATTGA 1464 0.541 MNQVPFSLSGLDSCAFPQVAMDCRIYGVTKLRIYLLLLLSGFPLLAFSDSPNPRLSISSSSSSSSVQINSNSVLVALLDSHYTELAELVEKAMLLQTLEDTVGAHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQSLLTFHIIPTRIGSETFPAQTGSTRHETLSKSEFLHLANNGTGEWTVDRAKIIHPSVVTRPDGVIHGIERLLIPRSVQDDFNRRRSLQSITAVKPEGAPEVDPRTHRLKKPAPPVKPGSPPVLPIYDAMAPGPALAPAPAPGPGGHHHHFNGEAQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAFLFDPDIYTDGRISVQGIDGVLFPPEEEEKPMTRTVQPAKVVVKYRRGKLLEAACWMLGTFGQDSRFTTCH 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0569 487 SUPERFAMILY FAS1 domain 72 214 IPR036378 -
Dere07g0569 487 SUPERFAMILY FAS1 domain 274 442 IPR036378 -
Dere07g0569 487 Gene3D FAS1 domain 314 441 IPR036378 -
Dere07g0569 487 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 25 484 IPR044654 -
Dere07g0569 487 FunFam Fasciclin-like arabinogalactan protein 16 290 441 - -
Dere07g0569 487 MobiDBLite consensus disorder prediction 234 259 - -
Dere07g0569 487 Pfam Fasciclin domain 81 213 IPR000782 -
Dere07g0569 487 Pfam Fasciclin domain 320 438 IPR000782 -
Dere07g0569 487 SMART fasc_3 336 441 IPR000782 -
Dere07g0569 487 SMART fasc_3 108 214 IPR000782 -
Dere07g0569 487 ProSiteProfiles FAS1/BIgH3 domain profile. 69 211 IPR000782 -
Dere07g0569 487 ProSiteProfiles FAS1/BIgH3 domain profile. 295 423 IPR000782 -
Dere07g0569 487 Gene3D FAS1 domain 73 214 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0569 Dere-ChrDere07 8742015 8744770 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0867 08 12473601 12476258 Dere07g0569 07 8742015 8744770 CCT