Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g0175 ATGCTAAGCAAGGTTAGGAGGAATTCAGATAAGGCTGTCTCTGGCTTAACTGCAATCTGGGGGAAGAAAATGCAGCTTCACATATCACCAAGTTTAAGGCATGTCACTGTGCTTCCTGGAAAAGGGTTCAAAGAGTTTATCAAAGTGAAGGTTGCATCAAGGAGAGTGTCCTACAGGATGCTCTTCTATTCCCTCTTGCTCTTCACATTCCTTCTTCGGTTTGTGTTTGTGTTGACTGCTGTGGATACCATTGATGGAGATATCAAATGCTCTACCATAGGTTGCCTGGGAAAAAAACTAGGACCAAGGATTCTGGGAAGAAAGCATGAATCAAATGTCCCAGAAGTGATATACAGAATATTAGATGAACCCATTGGCAAAGATGAAGTAGAAGGAAGATCTCATATTCCACAGACTTTAGAAGAGTTCATGACTGAAATGAAGGAAGGTGGATATGATGCCAAGACATTCGCTATCAAACTTAGAGAAATGCTCATCCTCATGGAACAAAGGACCAGGACAGCCAAAATCCAAGAATACCTATATCGCCATGTAGCATCAAGCAGCATACCCAAGCAGCTTCACTGCCTTGACCTGAGGCTGGCCGCTGAGCACACCAACAATGCACTAGCTCGCCTTCAGCTTCCTTCTGCAGAACTAGTCCCTGCCTTGGTTGACAACTCCTACTTCCACTTTGTTCTTGCATCAGATAATGTTCTGGCTGCTTCAGTGGTTGCAACTTCACTAGTCCAAAACTCCCAGCAACCCGGCAAGGTGGTTCTGCACATTATTACAGACAGAAAGACTTACTATCCCATGCAAGCTTGGTTCTCATTGCACCCTCTGTCACCTGCTGTAATTGAGGTCAAGGCATTGCACCATTTTGATTGGTTTACAAAAGGGAAGGTGCCTGTTCTTGAAGCCATGGAGAAAGATCAACGAGTGAGGTCACAGTTCAGAGGGGGGTCATCAGCTATTGTTGCAAATAGTACGGAGAAACCATATGTCGTTGCAGCAAAGCTACAAGCACTAAGTCCCAAGTATAACTCAGTGATGAACCACATAAGGATACATCTTCCAGAGTTGTTCCCGAGTCTCAACAAGGTAGTCTTCCTAGATGATGACATTGTGGTACAAACTGATCTTTCACCTCTGTGGGATATTGAAATGAATGGAAAAGTAAATGGAGCAGTACAAACATGTAGCGGAGAAGATAAGTTTGTAATGTCCAAGAGGTTGAAAAGCTATTTGAACTTTTCCCACCCTCTGATAGCCAATAATTTCAACCCCGACGAATGTGCTTGGGCTTATGGCATGAACATTTTTGATCTGGAAGCTTGGAGGAATACCAATATAAGCCTTACATACCATTATTGGGTTGAGCAGAATATAAAATCAGACCTGAGTCTATGGCAGCTAGGGACATTACCTCCCGGATTGATAGCATTCCATGGTCACGTCCACACCATTGATCCTTTCTGGCACATGCTGGGGTTGGGATATCAAGAAAATACATGTTTCTCTGATGCCGAAAGTGCTGGTGTCATCCATTACAATGGCAGGGCGAAACCATGGCTAGATATAGCTTTTCCACAGCTAAGGCCCTTGTGGGCTAAGTATGTCGACTTTTCAGACAGGTTCATCAAGAGCTGTCATATTAGGGCATCATAA 1671 0.4387 MLSKVRRNSDKAVSGLTAIWGKKMQLHISPSLRHVTVLPGKGFKEFIKVKVASRRVSYRMLFYSLLLFTFLLRFVFVLTAVDTIDGDIKCSTIGCLGKKLGPRILGRKHESNVPEVIYRILDEPIGKDEVEGRSHIPQTLEEFMTEMKEGGYDAKTFAIKLREMLILMEQRTRTAKIQEYLYRHVASSSIPKQLHCLDLRLAAEHTNNALARLQLPSAELVPALVDNSYFHFVLASDNVLAASVVATSLVQNSQQPGKVVLHIITDRKTYYPMQAWFSLHPLSPAVIEVKALHHFDWFTKGKVPVLEAMEKDQRVRSQFRGGSSAIVANSTEKPYVVAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIEMNGKVNGAVQTCSGEDKFVMSKRLKSYLNFSHPLIANNFNPDECAWAYGMNIFDLEAWRNTNISLTYHYWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHTIDPFWHMLGLGYQENTCFSDAESAGVIHYNGRAKPWLDIAFPQLRPLWAKYVDFSDRFIKSCHIRAS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g0175 556 CDD GT8_like_1 230 542 - -
Dere07g0175 556 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 553 IPR029044 -
Dere07g0175 556 Pfam Glycosyl transferase family 8 233 529 IPR002495 GO:0016757
Dere07g0175 556 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 547 IPR029044 -
Dere07g0175 556 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 129 553 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g0175 Dere-ChrDere07 3788202 3791731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g0175 24 556 Glycosyltransferase AT5G54690 79.626 0.0 879
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0568 08 8698675 8702330 Dere07g0175 07 3788202 3791731 CCT
Dere07g0175 07 3788202 3791731 Dere07g0175 07 3788202 3791731 ECH