Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g2086 ATGGAGGCTAGTTCAGCGGCGCCGGTGGTAGTAGCAAACAAGGTGAGGAACATAGTTCGTGCAGTGTTGTTCATGTTGAGAAAGAGAATAGCGAAGAGCAAACTAATGGTGGAGCTGCATTTGTTGGTGAAACGAGGGAAGATCGCCGCCGGCAAGGCCTTCGCCGGCACCCTGATGCTGCACCACCACTACGCCGCCTTCACCTGCCGCTCCGAAAACTCCCACCTCTCCTTCGTCTCTCCTCGCGAATACGAGTTCAGCTGCAGCAACAGCCCCGCCTTCCCCTTCCACGCCATTACCAACAAACGCAAGCAGCACAAGTCATCGTACAAACACTACGACGACGTTTACACCATGAACGCCGTTCAGAAGGTGCTTATTGAGATGATGAACCGTGAGAAGGTCGAGGTGGCGAATTCGCCGCCGTTGATGACGTTGCCTGGGTTTGGTAAGAGTCCCGTTGGGAGGCAACTCAGAATTACCGATTCGCCCTTCCCCCTGAAAGACGATGATGGAGATGGAGACGCACAAGTGGACAAGGCAGCTGAAGAATTTATTAACAAGTTCTATAAAGACCTCAATTTACAGAGAAGAATGGCTGCTTTTGATTCACCATACAACAATTTCTGGGACAGATAA 639 0.5133 MEASSAAPVVVANKVRNIVRAVLFMLRKRIAKSKLMVELHLLVKRGKIAAGKAFAGTLMLHHHYAAFTCRSENSHLSFVSPREYEFSCSNSPAFPFHAITNKRKQHKSSYKHYDDVYTMNAVQKVLIEMMNREKVEVANSPPLMTLPGFGKSPVGRQLRITDSPFPLKDDDGDGDAQVDKAAEEFINKFYKDLNLQRRMAAFDSPYNNFWDR 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g2086 212 Pfam Cotton fibre expressed protein 176 199 IPR008480 -
Dere06g2086 212 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 8 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g2086 Dere-ChrDere06 36403224 36403862 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g2086 06 36403224 36403862 Dere11g1614 11 29765114 29765653 ECH
Dere06g2086 06 36403224 36403862 Dere12g1530 12 27847224 27847802 ECH
Dere06g2086 06 36403224 36403862 Dere06g2086 06 36403224 36403862 ECH