Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1488 ATGCCCCAAAACGAAACTCTTTGCCACCATGGTGCGCTTACCACATGCTCAACCCCATATGAGAGTCCCGTTCTCACGTTGAATCTCAGAGAACCAGAGAAGCCCAATCTTAACTCCAATTCGAACTCCGTTTGCGCAATGGCTTCCACGAACTCAACATCCACCGACCCACTTCCTTCCGCAGCCGTCGAGGACATGGCGGTCAAGGCCGTGAACAAGCGCTACGAAGGCTTGGTCACTGTGCGGACCAAAGCCATAAAGGGCAAAGGAGCTTGGTACTGGGCGCATTTGGAACCCATTCTGATTCGGAACACCGATTCTGGCCTTCCCAAATCCGTGAAGCTCAAATGTTCATTGTGTGACTCCGTTTTCTCGGCGTCGAACCCATCGAGAACTGCTTCGGAGCACTTAAAGAGAGGAACGTGCCCCAACTTCAGCTCTGGTTTGAGACCCAATTCTTCAATTTCGCCTTTGCCTATATCTTCCGTGGCTTTGCCCAATTCAAACAATCACAAGAAGAGAAGCTCTTCTCATATGGGTGTCACTTCTCCTTATCAAAATCATTCCTTAGCAATGGTCGAGTCCTCTCGATTTTGTAGTGAACTGGGTTACTCACCAACCCAACTTAATACAGGGACGAATCAACAACATTTAATTTTGTCGGGTGGGAAGGAAGATTTGTGTGCATTGGCTATGTTTGAAGACAGTGTGAAAAAGCTCAAGAGTCCCAAGACCTCTCCTGGTCCTGCTTTGAGCAGGGAACAGATAAACTCTGCTTTAGAATTGCTCGCGGATTGGTTTTACGAGTCATGTGGGTCTGTGTCTTTATCAACCCTTGAGCACCCCAAGTTTCAAGCCTTTCTCGGCCAGGTGGGTTTGCCAACAACTTTGCGTCGTGAGATATCGGGTTCTCGACTTGATGCCAAGTTCAATGAGGCTGAGGCTGAGTCAGAGGCCAAAATACGAGATGCAATGTTTTTCCAAGTAGCTAGTGATGGTTGGAAGAACAATAATTGGTATAGCTTGTGTTGTGGAGGAGAGAATTTGGTTAAGTTTACTGTGAATCTTCCGCATGGGGCTAGTGTGTTCCAAAAGGCAGTGTTTACTGGGGGAGTTGTGTCTCCCAAATATGCAGAGGAGATTTTGTGGGAAACAGTCACGGGTATTTGTGGGAGTGCTGTGCAGAGATGTGCAGGCATTGTTGCAGACAAATATAAGGCCAAAGCATTGAGGAACTTGGAGACTCAATATCATTGGATGGTGAATATCCCTTGTCAGCTTCAAGGGTTTATTAGTTTAATCAAGGATTTTAATAACGACCTCTCACTTTTCAGGATCGTCACTGAAAATTGCCTAAAGCTTGCAAATTTTATAAACACTGAATCCCATGTCAGGAATAGTTTTCTCAAGTACCGGATGCAGGAGCTTGAGTTCGCTGGGTTGCTTCGTGTTCCTTCACCTAAATGTGATGCTCTTAAGAACTTCTCATCTGTCTTTCCGATGTTGGAGGACATCTTGAGCTGTGCTAGAGTAATTCAAATGGTTATGTTGGAGGACTCGTTTAAGGTAACATGCATGGAGGATCCACTTGCAAGGGAAGTCGCTGAAATGACTCAGAGTGATGGGTTTTGGAATGAATTGGAGGCAGTTTATTCACTTGTAAAACTTATCAAAGGAATGGTTCGCGACATGGAGGCCGAGAGGCCATTGATTGGTCGATGCCTTCCTCTTTGGGAGGAGCTGAGAACCAAAGTGAAGGAGTGGTGTGCAAAGTATAACATAGTGGAAGGACCTGTGGAGAAAATACTTGAAAAAAGATTCAGAAAAAATTATCACCCAGCATGGTCAGCTGCTTTTATTCTCGATCCACTTTACTTGATTAAAGATACAAGTGGAAAGTACCTTCCCCCATTCAAATGCTTGACACGTGAACAAGAGAAAGATGTAGATAAGCTATTGACAAGGCTAGTTTCCAAAGAAGAAGCTCATGTTGTGTTGATGGAGCTCATGAAGTGGAGGTCAGACGGGCTGGACCCACTTTATGCTCAGGCTGTTCAGATGAAACAAAGGGATCCGGTGACTGGGAAGATGAAAGTTGCAAACCCACTGAGCAGTAGACTTGTTTGGGAAACTTGCCTAAGTGAGTTTAAATCTCTGGGGAAGATTGCAGTAAGGCTTATTTTTCTCCATGCAACCTCATGTGGATTTAAGAGTAATTGGTCTTTCATGAGAAAAATTGCTGCGCATAAGCACTCAAGAATTGCTTTGGAAAGAGCTCAGAAAATGGTATACATTGCTGGTCATGCCAAGCTTGAAAGGCGAGACTTTTCTAATGAGGAAGAGAAGGATGCAGACCTGTTTGCCATGACAGGTAGTGAGGATGGCCTGCTTGCTGAGGTCTTTGCTGATGCACCCTTAGTGTAA 2424 0.4517 MPQNETLCHHGALTTCSTPYESPVLTLNLREPEKPNLNSNSNSVCAMASTNSTSTDPLPSAAVEDMAVKAVNKRYEGLVTVRTKAIKGKGAWYWAHLEPILIRNTDSGLPKSVKLKCSLCDSVFSASNPSRTASEHLKRGTCPNFSSGLRPNSSISPLPISSVALPNSNNHKKRSSSHMGVTSPYQNHSLAMVESSRFCSELGYSPTQLNTGTNQQHLILSGGKEDLCALAMFEDSVKKLKSPKTSPGPALSREQINSALELLADWFYESCGSVSLSTLEHPKFQAFLGQVGLPTTLRREISGSRLDAKFNEAEAESEAKIRDAMFFQVASDGWKNNNWYSLCCGGENLVKFTVNLPHGASVFQKAVFTGGVVSPKYAEEILWETVTGICGSAVQRCAGIVADKYKAKALRNLETQYHWMVNIPCQLQGFISLIKDFNNDLSLFRIVTENCLKLANFINTESHVRNSFLKYRMQELEFAGLLRVPSPKCDALKNFSSVFPMLEDILSCARVIQMVMLEDSFKVTCMEDPLAREVAEMTQSDGFWNELEAVYSLVKLIKGMVRDMEAERPLIGRCLPLWEELRTKVKEWCAKYNIVEGPVEKILEKRFRKNYHPAWSAAFILDPLYLIKDTSGKYLPPFKCLTREQEKDVDKLLTRLVSKEEAHVVLMELMKWRSDGLDPLYAQAVQMKQRDPVTGKMKVANPLSSRLVWETCLSEFKSLGKIAVRLIFLHATSCGFKSNWSFMRKIAAHKHSRIALERAQKMVYIAGHAKLERRDFSNEEEKDADLFAMTGSEDGLLAEVFADAPLV 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1488 807 SUPERFAMILY Ribonuclease H-like 374 766 IPR012337 -
Dere06g1488 807 PANTHER OSJNBA0013A04.12 PROTEIN 70 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1488 Dere-ChrDere06 27925409 27927832 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g1488 06 27925409 27927832 Dere01g1161 01 23486910 23489201 CCT
Dere06g1488 06 27925409 27927832 Dere01g1161 01 23486910 23489201 ECH
Dere06g1488 06 27925409 27927832 Dere06g1488 06 27925409 27927832 ECH