Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1161 ATGACTTCTACAACTTCCACATCCACCGACCCGCTTCCTTCCGTCGACGATATAGCCGTCAAGGCCGTGAACAAACGCTACGAAGGATTGGTCACTGTGCGAACCAAAGCCATAAAGGGCAAAGGAGCTTGGTACTGGGCACATTTGGAACCCATTCTGATTCGAAACCCCGATACCGGACTCCCCAAATCCGTGAAGCTTAAATGCTCCTTGTGTGATTCTGTGTTCTCGGCTTCGAACCCGTCAAGAACTGCTTCGGAGCACTTGAAGAGGGGCACGTGCCCCAATTTCAGCTCTGGTTTGAGACCCAATTCATCGCTCTCGCCGTTGCCGATATCTTCGGTGGCTTTGCCTGCTTCGAACAATCACAAGAAGAGAAGCTCTCCTCAAATGGTTCCCACTTCTCCTCCTCATGGTTATCAGAATCATTCCTTGGCATTGGTCGAGTCCTCTCGGTTTTATGGCGAATTGGGTTATTCACAGGTGCACAACTCAGTTGGGATTAATCAGCAGCATTTAATGCTTTCTGGTGGGAAGGAGGATTTGAGTGCATTGGCTATGTTTGAAGATAGTGTGAAAAGGCTCAAGAGTCCTAAGGCCTCACCCGGTCCTGTTTTAAGCAAGGAACAGATTAACTCTGCTCTGGAGTTGCTTGCGGATTGGTTCTACGAGTCCTGTGGGTCGGTGTCATTCTCAGCTCTTGAGCACCCCAAATTTCAAGCCTTCCTCAGCCAGTTGGGTTTGCCGACAGCAACTCTTCGACGTGAAATCTCGGGTTCTCGACTCGATGCTAAGTTCAATGAAGTCAAAATTGAGTCAGAAGCCAAAATAAGAGATGCTTTGTTTTTCCAATTATCCAGTGATGGTTGGAAGAACGAGAACTGGTACAGCTTGTGTTGTGGGGGAGAAAGTTTGGTGAAGTTTACTGTTAACCTTCCAAATGGGACTACTGTATTCCAAAAGGCAGTGTTTACTGCGGGAGTCACATCCTCCAAGTATGCAGAGGAGCTTTTATGGGAAACGGTTACGGGTATAAGTGGGAATGTTGTGCAGAGATGTGTAGGAATTGTAGCAGACAAATATAAGGCCAAGGCATTAAAGAACTTGGAGTTTCAGAATCATTGGATGGTAAATATTTATTGTCAGCTTCAGGGGTTCATTAGTTTAATCAAGGATTTTAACAAAGAGCTCCCACTTTTCAGGGACGTGACTGAGAATTGCCTAAAGGTTGCGAATTATATAAACAATGAATCTCAGGTTAGGAACATCTTTCTCAAGTACCGGTTGCAGGAGCTTGAATATGCTGGGTTACTTCGAGTTCCGTCTCCCAAATGTGATGCTTTGAAGAACTTTGCATCTGTCTTTCCACTATTGGAGGACATACTGAGCTGTGCTAGAGTGATCCAAATGGTTATGTTGGAAGACTCGTTTAAAGTAACATGCACGGAGAATCCACTGGCAAGGGAAGTTGCTGCGATGGTTCAGAGTGAGGGGTTCTGGAATGACCTGGAGGCAGTTTATTCTCTTGTAAAGCTTATCAAAGGAATTGTTCAAGATATTGAGGCTGAGAGGCCACTGATTGGTCGATGCCTGCCTCTCTGGGAGGAAACAAAGACCAAAGTGAAAGAGTGGTGTGCAAAATACAGTGTTGAAGAAGGACCTGTGGAGAAAATACTTGAAAAAAGATTCAGAAAAAATTACCACCCCGCTTGGTCAGCTGCATTTATACTCGACCCACTATACTTGATTAAAGACACAAGCGGGAAATACCTTCCTCCATTCAAATGCTTGACACGGGAACAAGAGAAAGATGTAGATAAGTTGTTGACAAGGCTAGCTTCACGAGAAGATGCTCATGTTGTGTTGATGGAGCTCATGAAATGGAGGTCAGAAGGGCTCGACCCACTTTATGCACAGGCCGTTCAGATGAAACAAAGGGACCCTGTGACTGGGAAGATGAAAGTAGCAAACCCACTGAGCAGTAGACTTGTCTGGGAAACTTGCCTAAGTGAGTTTAAGTCTCTGGGGAAGATTGCAGTAAGGCTAATTTTTCTGCATGCGACCTCATGCGGGTTTAAGAGTAATTGGTCATTCATGAGAAAAGTTTCTGCAAATAAGCACTCACGAGTTGGGTTGGAAAGAGCTCAGAAGATGATATACATTGCTGCTCATGCCAAGCTCGAAAGGAGAGACTTCTATAATGAGGAAGAAAAGGATGCAGAACTGTTTGCCATGACGAATAGTGAGGATGGGATGCTGGCTGAGGTCTTTGCTGATGCTCCCTTAGTGTAA 2292 0.4533 MTSTTSTSTDPLPSVDDIAVKAVNKRYEGLVTVRTKAIKGKGAWYWAHLEPILIRNPDTGLPKSVKLKCSLCDSVFSASNPSRTASEHLKRGTCPNFSSGLRPNSSLSPLPISSVALPASNNHKKRSSPQMVPTSPPHGYQNHSLALVESSRFYGELGYSQVHNSVGINQQHLMLSGGKEDLSALAMFEDSVKRLKSPKASPGPVLSKEQINSALELLADWFYESCGSVSFSALEHPKFQAFLSQLGLPTATLRREISGSRLDAKFNEVKIESEAKIRDALFFQLSSDGWKNENWYSLCCGGESLVKFTVNLPNGTTVFQKAVFTAGVTSSKYAEELLWETVTGISGNVVQRCVGIVADKYKAKALKNLEFQNHWMVNIYCQLQGFISLIKDFNKELPLFRDVTENCLKVANYINNESQVRNIFLKYRLQELEYAGLLRVPSPKCDALKNFASVFPLLEDILSCARVIQMVMLEDSFKVTCTENPLAREVAAMVQSEGFWNDLEAVYSLVKLIKGIVQDIEAERPLIGRCLPLWEETKTKVKEWCAKYSVEEGPVEKILEKRFRKNYHPAWSAAFILDPLYLIKDTSGKYLPPFKCLTREQEKDVDKLLTRLASREDAHVVLMELMKWRSEGLDPLYAQAVQMKQRDPVTGKMKVANPLSSRLVWETCLSEFKSLGKIAVRLIFLHATSCGFKSNWSFMRKVSANKHSRVGLERAQKMIYIAAHAKLERRDFYNEEEKDAELFAMTNSEDGMLAEVFADAPLV 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1161 763 MobiDBLite consensus disorder prediction 112 141 - -
Dere01g1161 763 PANTHER OSJNBA0013A04.12 PROTEIN 23 729 - -
Dere01g1161 763 MobiDBLite consensus disorder prediction 83 102 - -
Dere01g1161 763 SUPERFAMILY Ribonuclease H-like 325 728 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1161 Dere-ChrDere01 23486910 23489201 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g1488 06 27925409 27927832 Dere01g1161 01 23486910 23489201 CCT
Dere06g1488 06 27925409 27927832 Dere01g1161 01 23486910 23489201 ECH
Dere01g1161 01 23486910 23489201 Dere01g1161 01 23486910 23489201 ECH