Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1484 ATGCAGGATTGGGAAGAGGATCTGAAAAATCAGCTGCCGGCTTATTCCTCAACTGTTGAAAATTTGAGATATAAGTGCTCCAAAATGTCTGAACTGCAAAATGACCCTCTTCTGCAGTCTGAAACAACATGTGGATCACTTCTGTACGAACTTAAGATAATATGGGATGAAGTTGGGGAGTCTGAGACTGAAAGAGATAAAACGTTGCTTGAGATTGAACAAGAGTGTCTAGAGGTGTACAGAAGAAAAGTTGATCAGGCAAATTGGTCTAGAGCTCAGTTAAGGCGTGAAATTGCTGATTCGGAAGCAGACCTTGCAGCCATCTGTTCAGCAATGGGAGAGCGACCGGTACATATTCGGCAGTCTGATAAAAATGCTGGAAGCTTAAAGGAAGAGCTTGGTATAATTCTTCCAGAGCTGGAGGAGATGCGGAAAAGGAGGTCTGACCGAAGAAATCAGTTTATAGATGTCCAAGAGCAGATACAAGGTCTATCAAATGAGATCTATGGGCACAGAGAATATGCTTCTGTCGAAAATGTTGTGGATGAATCAGATTTAACCTTGAGAAAGCTCGAAGAATTGCACAGACAGCTGCATGCACTTCAAAAGGAGAAGAGTGATCGTCTCAAGAAGGTCCAGGATCAAATATATACTTTAAATTCTTTAAGTTCAGTGCTTGGTATGGACTTTAAGCAGACACTCTGTGACATTCATCCTAGTTTAGGGGATTCTGTAGGATCCAAGAGTGTAAGTAATGAAACAATCCAGCAGTTGGCTGCTGCAATACAAAAACTACGGGAAGTTAAATTACAGAGAATGCAGAAGCTCCAAGATCTTGCAACGACTATTTTGGAGCTCTGGAACTTGATGGATACACCAATTGAAGAGCAACAGAGATTTCAGAGTGTTACTTGTAACATAGCTGCTTCAGAACATGAAATAACTGAGTCTAACAGCTTGTCAGTGGACTTCATTGATTATGTTGAGGCGGAAGTAACTAGGTTGGAAGAGTTAAAAGCGAGCAAAATGAAAGAGCTTGTCTTGAGGAAGAGAACAGAGCTAGAGGAGATTTGTCGAAAAACACATTTGATCCCAGAAGTAGATAGTGCAGTCGAATATGTCGTTGAAGCTATAGACTCAGGAACTGTGGACCCTGCTTGTGTGCTTGAGCAAATTGAGCTTCAGGTTGCCAAAGTCAAAGAAGAAGCTTTTAGCAGAAAAGAAATACTTGAGAAGGTTGAGAAATGGTTGGCAGCACGTGATGAGGAGACTTGGCTGGAGGAGTACAACAAGGATGAGAATCGGTACAATGCTGGGAGAGGTACTCATCTCACTCTCAAGCGTGCTGAAAAAGCCCGTGCCTTGGTTAATAAAATGCCAGCAATGGTAGAGGCCTTGACTTCAAAAACCATCGCATGGGAAAAGGACAAAGGCATTGAGTTCACATATGATGGTATCTTTCTGCTTTCTATGCTTGAAGAGTACAATCAATTACGGCAAGAAAAAGAGCAAGAACGGCGTAGGCAACGGGATCTGAAGAAACTTCAGGGACAAATGATTGCAGAACAGGAAGTAAGATATGGGTCAAAACCAAGTCCTTCAAAGCCCCAGAGTGTTAAAAAGGCACCTAGGATGTCCAATGGAGGTGCAACCAATAGAGGAGTCTCTCATGGAGGAGCAACACTTCAAACTCCAAAACCTGATTCAAAAGGTACTCAGTCACGCTCAACGAGGAAGACTGACAAGGCACACCAAATTGACGAATTTAGTCACTTGGATGATGGTTCCTCATCTGTGTCATCAGCTAGAAGAAGGTTGAATATTGCTGGCATCTCTGTAAAAAAGCATTCATTCTGCGACATAGAATCTCCTTTGATGAGACAACCTTTTTCTCCTATCTCATCAACTGTATCATCAAGAGCAAACATGGCAAATGATGCCACAGATGAACAGAACATACAGAGCGAGAAGTTGCAGAAAAATTTTGCACTTAAAAATGTGCCATTCACTACTCCCTCCAAGACAGCAGCAACAATGGTAGAAGATGAAGAGAATAGAACTCCAAAGGCAATGCCTATTCCTGTCCCCACCACACCATCAGTAGTATCAAATGCTATGATTATGGCTATGACTCCAGCTCCTCCTCTATCTGTTCCTTTTGGATGTGACTTGGTGGTTCAAGAGATTGAATACTCTTTTGAGGAAAGAAGAGCTGGGTTTGTGTTGTGTTAG 2232 0.422 MQDWEEDLKNQLPAYSSTVENLRYKCSKMSELQNDPLLQSETTCGSLLYELKIIWDEVGESETERDKTLLEIEQECLEVYRRKVDQANWSRAQLRREIADSEADLAAICSAMGERPVHIRQSDKNAGSLKEELGIILPELEEMRKRRSDRRNQFIDVQEQIQGLSNEIYGHREYASVENVVDESDLTLRKLEELHRQLHALQKEKSDRLKKVQDQIYTLNSLSSVLGMDFKQTLCDIHPSLGDSVGSKSVSNETIQQLAAAIQKLREVKLQRMQKLQDLATTILELWNLMDTPIEEQQRFQSVTCNIAASEHEITESNSLSVDFIDYVEAEVTRLEELKASKMKELVLRKRTELEEICRKTHLIPEVDSAVEYVVEAIDSGTVDPACVLEQIELQVAKVKEEAFSRKEILEKVEKWLAARDEETWLEEYNKDENRYNAGRGTHLTLKRAEKARALVNKMPAMVEALTSKTIAWEKDKGIEFTYDGIFLLSMLEEYNQLRQEKEQERRRQRDLKKLQGQMIAEQEVRYGSKPSPSKPQSVKKAPRMSNGGATNRGVSHGGATLQTPKPDSKGTQSRSTRKTDKAHQIDEFSHLDDGSSSVSSARRRLNIAGISVKKHSFCDIESPLMRQPFSPISSTVSSRANMANDATDEQNIQSEKLQKNFALKNVPFTTPSKTAATMVEDEENRTPKAMPIPVPTTPSVVSNAMIMAMTPAPPLSVPFGCDLVVQEIEYSFEERRAGFVLC 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1484 743 MobiDBLite consensus disorder prediction 530 571 - -
Dere06g1484 743 Gene3D - 395 529 - -
Dere06g1484 743 MobiDBLite consensus disorder prediction 502 601 - -
Dere06g1484 743 MobiDBLite consensus disorder prediction 572 591 - -
Dere06g1484 743 MobiDBLite consensus disorder prediction 502 517 - -
Dere06g1484 743 Coils Coil 184 211 - -
Dere06g1484 743 FunFam 65-kDa microtubule-associated protein 6 396 529 - -
Dere06g1484 743 Pfam Microtubule associated protein (MAP65/ASE1 family) 46 537 - -
Dere06g1484 743 Coils Coil 488 518 - -
Dere06g1484 743 Coils Coil 77 104 - -
Dere06g1484 743 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 39 599 IPR007145 GO:0000226|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1484 Dere-ChrDere06 27869413 27878837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1484 39 577 EF-hand Containing Proteins AT5G62250 58.942 0.0 545
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g1484 06 27869413 27878837 Dere01g1156 01 23436879 23443960 CCT
Dere06g1484 06 27869413 27878837 Dere01g1156 01 23436879 23443960 ECH
Dere06g1484 06 27869413 27878837 Dere06g1484 06 27869413 27878837 ECH