Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g1156 ATGTCTAAACCACAAAATAATCCGCTTCTGCAAGTTGAAACAACATGTGGATCACTTCTGTATGAACTTCAGATAATATGGGATGAGGTTGGGGAATCTGAGACTGAAAGAGATAAAATGTTGCTTGAGCTTGAACGAGAGTGCCTAGAGGTTTACAGAAGAAAGGTAGATCAGGCAAACAGGAATAGAGCTCTATTAAGGCAGGCAATTGCTGATTCTGAAGCAGAACTTGCAGCCATCTGTTCAGCAATGGGAGAGCGGCCAGTACATATTAGACAGTCTGATATGAAGGCTGGAAGCTTGAAAGAAGAGCTTGGAAGAATTCTTCCAGAGCTTGATGAAATGCGGAAAAGAAAGTCTGACAGAAGAGATCAATTTATTCAAGTCCAAGAGCAGATACTAAATATTTCAAATGAGATCTATGGGCCCAAAGAGTATATTCATGCCAAGACACCAGTAGATGAATCTGATTTATCCATGAGGAAGCTTGAAGAATTGCACAGAGAGTTGCAGGCACTACAGAAAGAGAAGAGTGATCGGCTTAAGAAGGTCCACGACCACCTGTACACTTTGAATTGTCTATGTTCAGTGCTTGGTTTGGACTTTAATCAGATAGTCAGTGAAATTCATCCTAGTTTAGGAGATACTGAAGGACCTAAGAGTGTAACTAATGGTACAATCCAGCAATTGGCAGTTGCTATACAAAATCTGCGGGAAGTTAAATTGCAGAGAATGCAGATGCTCCAAGATCTTGCAACCACAATGTTGGAGCTCTGGAACTTGATGGATACACCAATCGAAGAGCAACAGATGTTTCAGAATGTTACTTGTAATGTAGCTGCCTCAGAACATGAAATAACTGAGCCTAACACCTTGTCTGTGGATTTCATTAATTATGTTGAGGCAGAAGTATCCAGGTTAGAAGAGTTAAAAGCAAGCAAAATGAAAGAGCTTGTGTTGAAGAAAAGAACAGAGCTAGAGGAGATCTGTAGAAAGATGCATTTGGTTCTAGAAGTAGATAATGCAGAGGAGTTTGCTATTGAAGCTATAGAGTCTGGATCTGTGGACCCTGCTTCTGTGCTTGAACAAACTGAGCTTCAGATTGCCAAGGTCAAGGAAGAAGCGTTTAGTAGAAAAGAAATACTTGAAAGGGTTGAGAAATGGTTGGCAGCGTGTGATGAGGAGTCGTGGCTTGAGGAGTATAACAGGGATGAAAATCGGTACAATGCAGGGAGAGGTGCTCATCTTACTCTCAAGCGAGCTGAGAAAGCCCGTGCCTTGGTTAATAAACTTCCAGCAATGGTAGATGCTTTGGCTTCAAAAACTGCTGCATGGGAAAAGGAGAAAGGCACTGAGTTCAAATATGATGGTATCCGTCTGCTTTCTATGCTTGAGGAGTACACCATATTACGGGAAGAGAAAGAGCAAGAACGTCGTAGGCAGAGGGATCTGAAGAAACTTCAGGGACAATTGATAGCGGAACAGGAGGCACTTTATGGATCAAAACCAAGCCCTTCAAAGCAGGCTGCAAAGAAGGTACCTAGGATGTCAACCGGAGGTGCAGCTAGTAGAAGAGTCTCCCTTGGAGGGGCAATGGTTCAAACTCCAAAAGCTACTCAGTCACGCCCCATGAGGAAGACCGACATTGCGCACCACATAGACAATCACCTGGATGATTCTGTCTCATCTTTATCATCAGGTATTTCCTTTAAACGCTACTTCTTTTATTTCTTGCCTTCTCTTCACCATGATTACCGATTTAGAACTCTTGCAAACCGATTTAGAATTCTTGCACAAACAGCTTACACTTCTATTTTGTCTTCCCAATGTGTATTCGCAGTTAAAAGAGGACTGGATATTGCTGGTGTCCCTGTAAAAAAGCACTCATTTGGCGGTGGTGCTGCGGCTGGGCTTGTTCGTGATATACAATCTCCATTGATGCGACAACCTTTCTCTCCCATTGCTTCAGCCGTCTCATCAAAAGCTAACATGACAAACCCCACAGATGAACTCAACGCACACAGTGAGAAATTGCAGAAAACAATTGCACCTAACAATCTGCCATTCAATTCTATTACTACCACTCCCTCCAAGACTGCCCCTATTGCGGTAGACGAAGAGAACAGAACTCCAAAGGCAGCAATGCCTATTCCTTTCCCAGCCACACCATCCACTGTGTCAGCCCCAATGAACATGGCCATCACCCCAGCTCCTCCTCCTCGTATGGTTCCTCTTGCGGTAGACGAAGAGAACAGAACTCCAAAGGCAGCAATGCCTATTCCTTTCCCAGCCACACCATCCACTGTGTCAGCCCCAATGAACATGGCCATCACCCCAGCTCCTCCTCCTCGTATGGTTCCTCTTGCAGGACTGCGTTTTTCTCGGAGGGCAAGCTCAACTGTCGCAGTTGTGTCACTTGTTTCTTCATCTTTTTAG 2436 0.4401 MSKPQNNPLLQVETTCGSLLYELQIIWDEVGESETERDKMLLELERECLEVYRRKVDQANRNRALLRQAIADSEAELAAICSAMGERPVHIRQSDMKAGSLKEELGRILPELDEMRKRKSDRRDQFIQVQEQILNISNEIYGPKEYIHAKTPVDESDLSMRKLEELHRELQALQKEKSDRLKKVHDHLYTLNCLCSVLGLDFNQIVSEIHPSLGDTEGPKSVTNGTIQQLAVAIQNLREVKLQRMQMLQDLATTMLELWNLMDTPIEEQQMFQNVTCNVAASEHEITEPNTLSVDFINYVEAEVSRLEELKASKMKELVLKKRTELEEICRKMHLVLEVDNAEEFAIEAIESGSVDPASVLEQTELQIAKVKEEAFSRKEILERVEKWLAACDEESWLEEYNRDENRYNAGRGAHLTLKRAEKARALVNKLPAMVDALASKTAAWEKEKGTEFKYDGIRLLSMLEEYTILREEKEQERRRQRDLKKLQGQLIAEQEALYGSKPSPSKQAAKKVPRMSTGGAASRRVSLGGAMVQTPKATQSRPMRKTDIAHHIDNHLDDSVSSLSSGISFKRYFFYFLPSLHHDYRFRTLANRFRILAQTAYTSILSSQCVFAVKRGLDIAGVPVKKHSFGGGAAAGLVRDIQSPLMRQPFSPIASAVSSKANMTNPTDELNAHSEKLQKTIAPNNLPFNSITTTPSKTAPIAVDEENRTPKAAMPIPFPATPSTVSAPMNMAITPAPPPRMVPLAVDEENRTPKAAMPIPFPATPSTVSAPMNMAITPAPPPRMVPLAGLRFSRRASSTVAVVSLVSSSF 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g1156 811 FunFam 65-kDa microtubule-associated protein 6 368 501 - -
Dere01g1156 811 Coils Coil 42 76 - -
Dere01g1156 811 Coils Coil 156 183 - -
Dere01g1156 811 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 512 - -
Dere01g1156 811 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 547 IPR007145 GO:0000226|GO:0008017
Dere01g1156 811 Coils Coil 460 490 - -
Dere01g1156 811 Gene3D - 367 501 - -
Dere01g1156 811 MobiDBLite consensus disorder prediction 500 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g1156 Dere-ChrDere01 23436879 23443960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g1156 11 519 EF-hand Containing Proteins AT5G62250 60.735 0.0 551
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g1484 06 27869413 27878837 Dere01g1156 01 23436879 23443960 CCT
Dere06g1484 06 27869413 27878837 Dere01g1156 01 23436879 23443960 ECH
Dere01g1156 01 23436879 23443960 Dere01g1156 01 23436879 23443960 ECH