Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0184 ATGGGACTCTTCCAACACTATGGAAATCCTGCTAAGCCATTAACGCATTGCGTTTCTTACATGTTTGTTCATGGCTCTAGGTATAGGCAAATAGGCAAGGGATCATACATTGGGCATATTGGTGTATTTAAAAGCTATGAGAGTAAACCCTTTTTTCTTCATCCTAATACAGTTGTTGAAAATGAATACTCCGAAGATGAAAGAAAGAAAAGGCTTGGATCTCTAAAGAAGGTGGCAATTAGTGCTTCAAATAAATTTAGGAATTCCTTTACAAAGCGGGGTAGGAGGCACAGTAGGGTTATGTCTCTGTCAATTGAGGATGACCTTGATGCAGAAGAGTTGCAGGCAGTTGATGCTTTTCGCCAAATGCTTATTTTGGAAGAGCTATTGCCTGCAAAGCATGATGATCATCACATGATGCTAAGATTCTTGAAAGCAAGGAAGTTTGACCTTGAGAAAACAAAGCAAATGTGGGCAGATATGCTTCAGTGGAGGAAAGAATTTAGTGCTGACACTATCATGGAGGATTTTGAGTTCAAGGAACTAGACGAAGTTTTAAAATACTATCCACAAGGGCATCATAGTATTGATAAGGATGGACGACCTGTTTACATTGAAAAACTGGGTCAGGTTGATCCTAACAAGCTGTTGCAAGTGACAACAATGGATCGCTATGTTAAGTATCATGTAAGAGAGTTTGAGAGGACCTTTGTTGTTAAGTTTCCTGCCTGTTCAATTGCAGCAAAGAAGCACATTGACCAGAGCACAACTATTTTGGATGTTCAAGGAGTGGGTCTGAAGAATTTCAACAAGGCTGCAAGGGATCTCATTCAGAGGCTTCAGAAGATTGATGGTGACAACTATCCTGAGACCTTGAACCGTATGTTCATCATCAACGCGGGCTCTGGGTTTAGGCTCTTGTGGAACACTGTTAAGTCATTCCTTGACCCCAAGACCTCTGCAAAAATCCATGTTCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAATCATTGATGCCAGTGAACTTCCAGAGTTCTTGGGTGGTACATGTACTTGTGCTGATAAAGGTGGTTGTATGGTTTCTGACAAGGGACCATGGAATGACCCAGAAATCTTGAGAATGGTCCAAAATGGCGAGGGAAAATGCAGAAGGAGATCCTTGTCTGGTATTGAGGAGAAAACGATAAATGAGGATGAAACAGCTTACAAAAAGTTTGCAAAGCAATTGAGTGGGTATGGATATGATGTCCCAATGGTTGACAAAGCTGTTGATTCGCCTTGGAAGAAAGTAGCACAGAACGATAAATTGGCACTATCTAAAGATAGTTGCAAGCCTTCTGATAGGTTGAGCAGTCAAATTACTGGAGGGTTCATGACAATTATAATGGGAATTATAGCATTGATCCGGTTGACGAAGAACATGCCTAAGAAGCTCACTGAATCTGCCCTTTATAGCAGCTCAACATATTATGATGGGACCATGATGAAAGGTCATCGGAAGTTGCCGGCGCCAGCACTCTCTAGTAGTGAGCACATGTTGTTGATGAAGCGCATGGCTGAGCTTGAAGACAAGGTGAATACTCTTGCTGTCAAACCTCCCATGCCACCAGAAAAGGAGGAAATGTTGAATGTTGCTCTAAGCAGAGTTAGTGCTCTTGAGCAAGAGTTGAATGAAGCCAAAAAGGCACTTGATAATGCACTTGCTCGACAAGGACAGCTCCAAGCAGCTTTTGATAAGAAGAAGAAGAAAAAGAGATTTGTATTTCCGCTGGTAAGCTCAAGGCAAGGATGTCGTATTGATGGTCATCTTCATCTTCTTCAGCCACGTCCATATGATGTTGCATTTGGGTCTTCTTGCTTTGTCTAA 1869 0.4173 MGLFQHYGNPAKPLTHCVSYMFVHGSRYRQIGKGSYIGHIGVFKSYESKPFFLHPNTVVENEYSEDERKKRLGSLKKVAISASNKFRNSFTKRGRRHSRVMSLSIEDDLDAEELQAVDAFRQMLILEELLPAKHDDHHMMLRFLKARKFDLEKTKQMWADMLQWRKEFSADTIMEDFEFKELDEVLKYYPQGHHSIDKDGRPVYIEKLGQVDPNKLLQVTTMDRYVKYHVREFERTFVVKFPACSIAAKKHIDQSTTILDVQGVGLKNFNKAARDLIQRLQKIDGDNYPETLNRMFIINAGSGFRLLWNTVKSFLDPKTSAKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMVSDKGPWNDPEILRMVQNGEGKCRRRSLSGIEEKTINEDETAYKKFAKQLSGYGYDVPMVDKAVDSPWKKVAQNDKLALSKDSCKPSDRLSSQITGGFMTIIMGIIALIRLTKNMPKKLTESALYSSSTYYDGTMMKGHRKLPAPALSSSEHMLLMKRMAELEDKVNTLAVKPPMPPEKEEMLNVALSRVSALEQELNEAKKALDNALARQGQLQAAFDKKKKKKRFVFPLVSSRQGCRIDGHLHLLQPRPYDVAFGSSCFV 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0184 622 Coils Coil 543 577 - -
Dere06g0184 622 Gene3D - 169 380 IPR036865 -
Dere06g0184 622 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 61 582 - -
Dere06g0184 622 SMART sec14_4 181 352 IPR001251 -
Dere06g0184 622 Pfam CRAL/TRIO, N-terminal domain 128 160 IPR011074 -
Dere06g0184 622 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 181 355 IPR001251 -
Dere06g0184 622 Gene3D - 95 168 - -
Dere06g0184 622 CDD SEC14 179 350 IPR001251 -
Dere06g0184 622 FunFam SEC14 cytosolic factor 169 381 - -
Dere06g0184 622 SUPERFAMILY CRAL/TRIO domain 181 377 IPR036865 -
Dere06g0184 622 SMART CRAL_TRIO_N_2 136 161 IPR011074 -
Dere06g0184 622 PRINTS Cellular retinaldehyde-binding protein signature 341 350 - -
Dere06g0184 622 PRINTS Cellular retinaldehyde-binding protein signature 139 161 - -
Dere06g0184 622 PRINTS Cellular retinaldehyde-binding protein signature 308 327 - -
Dere06g0184 622 SUPERFAMILY CRAL/TRIO N-terminal domain 107 177 IPR036273 -
Dere06g0184 622 Pfam CRAL/TRIO domain 187 349 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0184 Dere-ChrDere06 2483795 2490350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0184 115 346 Acyl Lipid Metabolism Gene Families AT5G47730 27.801 1.31e-19 89.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g0184 06 2483795 2490350 Dere06g0184 06 2483795 2490350 ECH
Dere06g0184 06 2483795 2490350 Dere13g0686 13 8676383 8681729 ECH