Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2540 ATGGAGGAAGAGAAGGCTCCTCTCGGTGGTGGTGGCGGCGATTCGTCGAGGGCTTCGTCCTCTTTTGTGAAAAAGGGCGACCGCCATATGTTCACGGTGGAGCTCCGGCCGGGGGAGACCACTATAGTCTCGTGGAAGAAGCTAATGAAAGACTCAAACAAGGTTAATGGGTCCACTCTGGCCCCCGAACATCTAACCACTGCACACCCCGCCCTGGAATCCAGAATCGCTCCTGGACAGCCTACTGAAAATGAAGCAAAAGATGCTGCTTTTCCGCATCGTTTCAGTGCTGTAATAGAGAAGATTGAACGCCTTTACATGGGTAAGGATAGCAGTGATGAGGAGGATCTCCTTGATGTTCCTGATGATGATCAATATGATACAGAAGACTCTTTCATTGATGATGCTGAGCTGGATGAATATTTTGAGGTTGATAATTCTGCAATCAAACATGATGGATTCTTCGTGAACAGGGGAAAATTGGAACGCATAAATGAACCTCTGGAATTACCAAACCAGCAACCAAAGAAAAGGCGCAGAAAAGAGATATTGAAGAATCCTGGTGGAAGTTATGATGCTCAGGGATCAAATCGACATGGAAGATTGGGCAAGACTGCAGCTGGAAAGGCAGCATCATTACCAGTGAAAAAGACGTTGAATTCCTCACAGAACTTGCCTCTATCTGTTGAACATCATGAGGACTCAAAATTTCGGAATCAATTGGAAGCCTCTGGAATTTGCTCAAAAAAGAATATTGCTGATGCTAAACCAATTGTAGATCCTTCTGTCGCTTTGAATGTATCAAATGATGATGCTCATCCATCTGTGACAGAAGCAAAGGATATTGATAAACAGAATATGGGAAACCTTCAATCTAGGAACACGATTGACAAATACAAAGATGCAAGCGATGCTTCTCAGAAGAAGTACCATGAGAAAAGTGCTTTTGCACATTCCAAATCCCAACCTGGAAGACCTACAAGTAGTATTGATGGTCTGGAAAATAGAGTTCATTCAAAAGAGAAAAATGGCATCCGGGAGCTGCCAGATCTTAACTTGTCTGAGGGAAAGACTACCATGCAAGCAACAAAATTGCCATACATGCCCAAGAAAGAAGGCTCTAGTGTTAGGCCAAAAACATCAATGCTTGAAAAGGCTATTAGAGAGTTAGAGAAGATGGTTGCAGAATCGAGGCCACCTGTACTGGAAAACCAGGAGGCTGATACTACATCCCAGGCAGTCAAAAGGAGGTTGCCTAGAGAAATAAAACTAAAGCTTGCTAAAGTTGCTAGATTAGCGGTACTGGCAAATCAGGCAAGCCATGGTAAAGTATCAAAGGAGTTAATTAACCGTCTTATGAGTATTTTGGGGCACCTGATTCAGCTCAGAACATTAAAGAGAAACTTAAAAGTCATGATCAGCATGAGTCTGTCAGCAAAGCAGGAGAAAGATGATAGGTTTCAAAACATAAAGAAGGAAGTTGTTGAGATGATTAAGATGCAGGGCCCCTCTCTGGATTCCAAGCAACAGCAGCCAGGTTCAGCATCTGGCGATTTTCAAGAATTTGGTCCTGATGGAAAAGCATTAGATAAAAGGATGGATACTGCATTGGAGGACAAGATTTGTGATCTCTATGACCTTTTTGTTGATGGGTTGGATGATGATGCAGGTCCACAAATCAGAAAGCTGTACGCTGAGCTTGCGGAATTATGGCCAAATGGTTACATGGACAACCGTGGGATTAAAAAAGCAATTTGCAGGTCAAAAGAGAGGCGCAAAGCACTGTACATCAGACACAAGGAGCATGAAAAAGTCAAGAGTAAAAAGATGTTGGCACCTCGGCAAGAGGAGACTGTTCGATTTGATCCTGGTTCAGTTGCCTCACAACAGAACATGCGGGAGAGATTAGCACCAGAATCTAGCAGTCAGGCATTTACTTCAGGGAACAAGCCAGTTTCTAATACCACAGTCGGGGTCCCCAGCCCGCTGGTGAATACTTCAAAACAGGAAAAAATAAAGGGAGTTTCAAACAATTCCCTGGAAGATGTTAGGGTTGCAGATGGTGGTTTAACAAAGAAGGTAAAGAGGAAACCAGAATTGGAGTTGGAAGGTACTCAGTTTCGTCCTGAGAAGCTTGCTTCTTTGCAGGGAGAAGAAAGGCCCAAGTCTTTAAGGCAGTCTGCAGGTCTTCCCCTCAAGTCAAATCCTCAGGCAACTTCACTTACAGGTCTTGAGCAGTCAAGTTAA 2247 0.4375 MEEEKAPLGGGGGDSSRASSSFVKKGDRHMFTVELRPGETTIVSWKKLMKDSNKVNGSTLAPEHLTTAHPALESRIAPGQPTENEAKDAAFPHRFSAVIEKIERLYMGKDSSDEEDLLDVPDDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERINEPLELPNQQPKKRRRKEILKNPGGSYDAQGSNRHGRLGKTAAGKAASLPVKKTLNSSQNLPLSVEHHEDSKFRNQLEASGICSKKNIADAKPIVDPSVALNVSNDDAHPSVTEAKDIDKQNMGNLQSRNTIDKYKDASDASQKKYHEKSAFAHSKSQPGRPTSSIDGLENRVHSKEKNGIRELPDLNLSEGKTTMQATKLPYMPKKEGSSVRPKTSMLEKAIRELEKMVAESRPPVLENQEADTTSQAVKRRLPREIKLKLAKVARLAVLANQASHGKVSKELINRLMSILGHLIQLRTLKRNLKVMISMSLSAKQEKDDRFQNIKKEVVEMIKMQGPSLDSKQQQPGSASGDFQEFGPDGKALDKRMDTALEDKICDLYDLFVDGLDDDAGPQIRKLYAELAELWPNGYMDNRGIKKAICRSKERRKALYIRHKEHEKVKSKKMLAPRQEETVRFDPGSVASQQNMRERLAPESSSQAFTSGNKPVSNTTVGVPSPLVNTSKQEKIKGVSNNSLEDVRVADGGLTKKVKRKPELELEGTQFRPEKLASLQGEERPKSLRQSAGLPLKSNPQATSLTGLEQSS 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2540 748 MobiDBLite consensus disorder prediction 604 748 - -
Dere05g2540 748 Pfam HPC2 and ubinuclein domain 121 162 IPR014840 -
Dere05g2540 748 MobiDBLite consensus disorder prediction 265 357 - -
Dere05g2540 748 MobiDBLite consensus disorder prediction 1 27 - -
Dere05g2540 748 MobiDBLite consensus disorder prediction 282 296 - -
Dere05g2540 748 MobiDBLite consensus disorder prediction 503 517 - -
Dere05g2540 748 MobiDBLite consensus disorder prediction 728 748 - -
Dere05g2540 748 MobiDBLite consensus disorder prediction 110 129 - -
Dere05g2540 748 MobiDBLite consensus disorder prediction 165 223 - -
Dere05g2540 748 MobiDBLite consensus disorder prediction 297 318 - -
Dere05g2540 748 MobiDBLite consensus disorder prediction 334 348 - -
Dere05g2540 748 MobiDBLite consensus disorder prediction 502 524 - -
Dere05g2540 748 MobiDBLite consensus disorder prediction 115 129 - -
Dere05g2540 748 MobiDBLite consensus disorder prediction 686 706 - -
Dere05g2540 748 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 14 704 - -
Dere05g2540 748 MobiDBLite consensus disorder prediction 622 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2540 Dere-ChrDere05 35887552 35896953 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2540 05 35887552 35896953 Dere04g1079 04 11585033 11593544 CCT
Dere05g2540 05 35887552 35896953 Dere05g2540 05 35887552 35896953 ECH