Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1079 ATGAAGGAAGAGAAGGCTCCTCCGGGTGGTGGTGATTCGGCAAGGGCTTCGTCCTCGTTTGTCAAAAAGGGCGACCGCCAAATTTTCACGGTGGAGCTCCGACCAGGAGAGACCACTATAGTCTCATGGAAGAAGCTGATGAAAGACGCTAACAAGGGTAATGGATCCACTACTGCCCCCGAACATCCCGCCAATGCACACCCCGCCCTGGAGTCAAGAATCGCTCCTGGACAGCCTACTGAAAACGAAGTAAAAGATGCTTCCCAGCCAAACCGTTTCAGTGCTGTAATAGAGAAGATTGAACGTCTTTACATGGGTAAGGACAGTAGTGACGAGGAAGATCTACTTGATGTTCCTGATGATGATCAGTATGATACAGAAGACTCTTTCATTGATGATGCGGAGCTGGATGAATATTTTGAGGTTGATAATTCTGCAATCAAACATGATGGGTTCTTTGTCAATAGGGGGAAATTGGAACGCATAAACAAATCATCAGTATCAGCTGATCAGCATCCAAAGAAAAGGCGCAAAAAAAATGTGTTGAGGAATCCTGGTGAAAGTTATGATGGTCAAGGATCAAATAAACATGTAAAGCTGGGCAAGACAGCATTGTTACCAATGAAGAATACATTTAATTCGTCGCAAAAAATGGTTATACCTAGTGAAAATTATGATGATACGAAATTTCAGAATCAATTGGATATCCCGGGAATTAGTTCAAAAAAGAAAACTGCCGATACTAAACCAATGTTGGATTCTTCGGTCTCTTTGAAAGTTTCAAATGATGATGCTCCTACTTTTGTGACTGAAGCAAAAAATGTTGATAAACAGAAGATAGGAGTTCTTCAATTTAAGAACATAAGCGATAAATACAAAGAAGCAGGTGCATCATCTGATGCTTCTCCTCAGAAGTATCGTGAAAAAGGTGCCTCTGGACATTCCAAATCCCAACCTGGAAGACCCTCAAGTAATATTGATGCTTTGGAAGGTACAAGTCGGTCAAAAGAAAAAAATGGCATCTGTGAACTGCCAGATCTTAACTTGTCTGAGGACAAGTCTGCCATGCAAGCAGCAAGGAAGGGAAGACAGAGGTACAAAAGGGACCAAGGACCAAAAGAAGGTCCCAGTGGATGCTTGACTAGGTGGCACACCGAAATAGACCAATATGGGCTTGCAGAATTGAAATCGCAATACATGCACAAGAAAGATGGTTCTAGTGCTAGGCCAAAAGTTTCAATGCTTGAAAAGGCAATTCGAGAGTTAGAGAAGATGGTAGCAGAATCAAGGCCACCTGCAGTGGAAAACCAGGAGGTTGATACTGTATCCCAGGCGGTCAAAAGGAGATTACCTAGAGAAATAAAGCTAAAGCTTGCTAAAGTTGCTAGATTAGCAGCATGCCATGGGAAAGTATCAAAGGAATTAATTAATCGTCTTATGAGTATTCTGGGACATCTGATTCAGCTTAGAACATTGAAGAGAAATTTAAAAGTGATGATCAATATGGGCATGTCAGCAAAGCAGGAGAAAGATAATAGATTTCAACAGATAAAGAAGGAAGTTGTTGAGATGATTAAGGTGCAGCCCCCGTTGCTGCAATCGAAGCAACAAGGTGGAGCATCCGGTGATTGTCAAGAATTTGACCCTTATGAAAAAGCTTTAACTACAAGGAGGCTTAGTATGGACACTGCACTGGAGGACAAAATTTGTGATCTCTATGACCTTTTTGTTGATGGGTTGGATGAAGATGCAGGTCCACAAATCAGAAAATTGTATGCTGAGCTTGCGCAATTATGGCCAAGTGGTTACATGGACAATCATGAGATTAAACATGCAATTTTCAGAGCAAAAGAGAGGCGCAAATCACTGTACAGCAGACATAAGGATCCGGACAAAATTAAGAGGAAAAAGATGTTGGCTACTCGGCAAGAGGAGACAGTTCGATTTGATGCTAGTTCAAATGCTTCACGTCAGAACATACGAGAGAGAGTAGCTCCAGAATCTAGCACTCATGCATTTACTTCAGTGAACAAGCCAGTTTCTAATACAGTCACTACTGCCCGGGCTTCTAGTCCTTCATTGAATGGTCAAAAACAAGAGAAAGTTAAGGGAAGTAATTCTCGGGATGATGTCAGGATCGCAGATGGAGTTTTAACAAAGAAGGTAAAGAGAAAACCTAGACTGGAATTGGAAGGACCTCATATTCGTCCAGAGAAGCTAGGATTATCGCATGGTGAAGAAAGGCCTAAGACCCTAAAGCAGTCTGCAGGTCATCCTCTTAAATCAAACTTTCAACCGACATCTATTCCGAGTCTTGAACAGTCAAGTTAA 2331 0.4191 MKEEKAPPGGGDSARASSSFVKKGDRQIFTVELRPGETTIVSWKKLMKDANKGNGSTTAPEHPANAHPALESRIAPGQPTENEVKDASQPNRFSAVIEKIERLYMGKDSSDEEDLLDVPDDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERINKSSVSADQHPKKRRKKNVLRNPGESYDGQGSNKHVKLGKTALLPMKNTFNSSQKMVIPSENYDDTKFQNQLDIPGISSKKKTADTKPMLDSSVSLKVSNDDAPTFVTEAKNVDKQKIGVLQFKNISDKYKEAGASSDASPQKYREKGASGHSKSQPGRPSSNIDALEGTSRSKEKNGICELPDLNLSEDKSAMQAARKGRQRYKRDQGPKEGPSGCLTRWHTEIDQYGLAELKSQYMHKKDGSSARPKVSMLEKAIRELEKMVAESRPPAVENQEVDTVSQAVKRRLPREIKLKLAKVARLAACHGKVSKELINRLMSILGHLIQLRTLKRNLKVMINMGMSAKQEKDNRFQQIKKEVVEMIKVQPPLLQSKQQGGASGDCQEFDPYEKALTTRRLSMDTALEDKICDLYDLFVDGLDEDAGPQIRKLYAELAQLWPSGYMDNHEIKHAIFRAKERRKSLYSRHKDPDKIKRKKMLATRQEETVRFDASSNASRQNIRERVAPESSTHAFTSVNKPVSNTVTTARASSPSLNGQKQEKVKGSNSRDDVRIADGVLTKKVKRKPRLELEGPHIRPEKLGLSHGEERPKTLKQSAGHPLKSNFQPTSIPSLEQSS 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1079 776 MobiDBLite consensus disorder prediction 648 701 - -
Dere04g1079 776 MobiDBLite consensus disorder prediction 162 198 - -
Dere04g1079 776 MobiDBLite consensus disorder prediction 293 380 - -
Dere04g1079 776 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 11 721 - -
Dere04g1079 776 MobiDBLite consensus disorder prediction 727 776 - -
Dere04g1079 776 MobiDBLite consensus disorder prediction 316 330 - -
Dere04g1079 776 MobiDBLite consensus disorder prediction 113 127 - -
Dere04g1079 776 MobiDBLite consensus disorder prediction 648 714 - -
Dere04g1079 776 MobiDBLite consensus disorder prediction 727 754 - -
Dere04g1079 776 MobiDBLite consensus disorder prediction 356 372 - -
Dere04g1079 776 MobiDBLite consensus disorder prediction 756 776 - -
Dere04g1079 776 Pfam HPC2 and ubinuclein domain 119 160 IPR014840 -
Dere04g1079 776 MobiDBLite consensus disorder prediction 1 26 - -
Dere04g1079 776 MobiDBLite consensus disorder prediction 229 253 - -
Dere04g1079 776 MobiDBLite consensus disorder prediction 50 92 - -
Dere04g1079 776 MobiDBLite consensus disorder prediction 108 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1079 Dere-ChrDere04 11585033 11593544 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2540 05 35887552 35896953 Dere04g1079 04 11585033 11593544 CCT
Dere04g1079 04 11585033 11593544 Dere04g1079 04 11585033 11593544 ECH