Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2539 ATGGTAGCATGTCTCTACACGTGCCACATGGTATTCTCCGTCGACATGAATCCGCTCCTTCCGCCGGCGACCGGAGTATTCTCACCGTCGTTTCTCTATTTCTTTAAACCTCCTCCGTCCACGGGCAATGGCAGAATCTTCGGTTTTGGGTTGGGGCTCGGGCTCGGGTTCGAGTGGCAAAGGAATAAGGGAAGGCTCAGGAGACAGCTCAAATTCGTTATCAGCGCAGAGTTCTCGAAGTCAATTTCCTTGAATTTCGGATTGGATTCTCAGAACTTGAATTCGTTCCAATCCCATGATCCATCACAGCTTCCTTGGATGGGTCCTATTCCCGGTGATATTGCTGAAATTGAGGCATATTGTAGGATCTTTAGGAGTTCTGAAAGGCTTCACTCTGCATTAATGGATGCTTTATGCAATCCGTTGACTGGTGAATGCAGTGTCTCTTATGAGGTCTCATCAGATGAGAAACCTCAACTTGAAGATAAAATAGTCTCTGTCCTGGGATGTATGGTATCCCTTATGAACAAAGGCAGGGAGGATATTCTTTCTGGAAGATCCTCAGTTATGAATTCCTTTCGCACTGTACAGGTTAGCACAATGGAGGATAATCTCCCTCCACTTGCCATTTTTAGGAGTGAGATGAAAAGGTGTTGTGAGAGCTTGCACATAGCTCTTGAGAACTATTTGACATCTGATGATGACCGAAGCATAGACGTCTGGAGAAAACTTCAGAGACTGAAGAATGTCTGCTATGATTTAGGTTTTCCTCGTAGAGAGCATTATCCTTGCCATACATTATTTGCAAATTGGGGTCCTGTTTATTTATCCTCTTCTACAGAGGACACAGGGTCCAAAGATTCTGAGGCAGTTTTTTGGACAGGAGGCCAGGTAACAGAAGAAGGTCTAAAATGGTTACTGGATAAAGGATATAAAACTATTATAGATCTCAGAGCAGAAACTGTAAAAGATAACTTCTATCAAGCAGCCATTCATCATGCTATTGCCTCTGGGAAAATTGAATTGGTCAAAATCCCAGTGGAAGTTAGGACTGCACCGACAATGGAACAGGTTATGAGGTTTGCATCTTATGTTTCTGATGGCAGCAAAAGACCCATCTACCTTCACAGCAAGGAAGGAATTTGGAGAACATCTGCCATGGTTTCTAGATGGAGGCAGTACATGACTCGCTCTGCATCTAATCAAGTGGTTCCTTCCAGTGATATATATACATATGGATCCAGAAAACTTAAGGATTCTTTGGTGACTGGAAAGAGATCCTTTCTTGAAAAGGATACTGATTCATTGCAAGAGAATCTGGGTGCAGCACATAGTTCTGTTGGAACATGGGACCAAAGCACCACTCTGAAGAAAAATAACAAAAAGATGCAATGTAATGGGACTTTGAGGGGATCTATCGATGGAGATATGACATTAACAGAAACCCCTTCCACTCCTAATGGTGCAGGATCTTTTTCAAGTTTCTCCCACATGACTAACCCTTTAAAAGCTCAGGTCCCTCCTTGTGATATCTTTTCCAAAAGGGAGATGTCCAACTTTCTTGAAAATAGGAAGATTTCACCACCCTCTTATTTCAGATATCAAATTAGAGAATCAGAAAAATTACCAGATTCAAGAAACATGCATATTGGAAGATTGCAGGGGGAAGTGATTGCCAGCAATGTTGATATTCCTTTACCTGGACTTGTGGACCCGGGAAGTTCCAATGGGTCTTCTCATTTGGATTATTCTTCTGGAGAGGCACAAATTACGATTGGCAGGATTACAAATTTAGTGAATGGAAGCACTTCTAGTTCTGTTAGGACAACAGAAAATGGATCTAGTGATGGGGAAATGTATCCCATGTTTAAAGCCAATGTCTCCACCACTATGAGCAATAATTATGATCATGTCACCAGTAAATCTCAGAAGGTTGGAGACAGCATTGCTGAGGCTAGGTTAGCCTTAGGTGAAGAAGATTTGGCACCCATTGCAGGGAATATGTGTGCGTCTACAACAGGCGTTGTAAGGGTGCAGTCAAGGAAGAAGGCAGAGATGTTCTTAGTACGAACAGATGGATACTCTTGTACTAGAGAAAAGGTGACTGAATCTTCTTTGGCTTTCACTCACCCTAGCACCCAGCAACAGATGCTTATGTGGAAAACTGCACCAAAGACTGTATTGTTGTTGAAAAAACTGGGGGAAGAATTGATGGAAGAAGCAAAAGAGGTGACCTCTTTTTTATATTACCAAGAAAAAATGAATGTTGTTGTGGAACCTGATGTGCATGATATATTTGCTAGAATTCCAGGGTTTGGATTCGTCCAGACTTTTTATAGTCAAGATACCAGTGATCTACATGAGAAGGTAGACTTTGTGGCATGCTTGGGGGGAGATGGTGTTATACTGCACGCTTCAAATTTATTTAGAGGTGCTGTCCCCCCTGTTGTATCATTCAACCTTGGTTCCCTTGGTTTTCTAACATCTCATAATTTTGATGACTACAGGCAGGACTTAAGACAAGTCATTCATGGAAATAATACACGAGATGGTGTATATATCACTCTCAGAATGCGTCTCCGATGCGAACTTTTTCGCAAGGGTAAAGCTGTGCCGGGGAAAGTATTCGATGTTCTTAATGAAGTTGTCATTGATCGAGGTTCTAATCCATACCTTTCAAAAATTGAATGTTATGAACATGATCGACTTATAACTAAGGTACAAGGTGATGGAGTCATTGTGGCCACCCCTACGGGAAGTACTGCCTATTCTACAGCTGCTGGAGGTTCTATGGTCCATCCAAATGTTCCATGCATGCTGTTTACCCCAATATGTCCACATTCACTCTCATTTAGACCAGTTATTCTTCCTGATTCTGCTCGACTTGAATTAAAGATTCCAGAAGATGCAAGAAGCAATGCATGGGTTTCATTCGATGGGAAGAGAAGGCAGCAACTTTCAAGAGGAGATTCTGTCCGTATATATATGAGTCAGCATCCGCTTCCAACTGTTAACAAGTTTGACCAAACAGGGGACTGGTTTCATAGCTTGATTCGCTGCCTAAATTGGAATGAAAGGCTTGATCAAAAGGCCTTATAA 3099 0.4211 MVACLYTCHMVFSVDMNPLLPPATGVFSPSFLYFFKPPPSTGNGRIFGFGLGLGLGFEWQRNKGRLRRQLKFVISAEFSKSISLNFGLDSQNLNSFQSHDPSQLPWMGPIPGDIAEIEAYCRIFRSSERLHSALMDALCNPLTGECSVSYEVSSDEKPQLEDKIVSVLGCMVSLMNKGREDILSGRSSVMNSFRTVQVSTMEDNLPPLAIFRSEMKRCCESLHIALENYLTSDDDRSIDVWRKLQRLKNVCYDLGFPRREHYPCHTLFANWGPVYLSSSTEDTGSKDSEAVFWTGGQVTEEGLKWLLDKGYKTIIDLRAETVKDNFYQAAIHHAIASGKIELVKIPVEVRTAPTMEQVMRFASYVSDGSKRPIYLHSKEGIWRTSAMVSRWRQYMTRSASNQVVPSSDIYTYGSRKLKDSLVTGKRSFLEKDTDSLQENLGAAHSSVGTWDQSTTLKKNNKKMQCNGTLRGSIDGDMTLTETPSTPNGAGSFSSFSHMTNPLKAQVPPCDIFSKREMSNFLENRKISPPSYFRYQIRESEKLPDSRNMHIGRLQGEVIASNVDIPLPGLVDPGSSNGSSHLDYSSGEAQITIGRITNLVNGSTSSSVRTTENGSSDGEMYPMFKANVSTTMSNNYDHVTSKSQKVGDSIAEARLALGEEDLAPIAGNMCASTTGVVRVQSRKKAEMFLVRTDGYSCTREKVTESSLAFTHPSTQQQMLMWKTAPKTVLLLKKLGEELMEEAKEVTSFLYYQEKMNVVVEPDVHDIFARIPGFGFVQTFYSQDTSDLHEKVDFVACLGGDGVILHASNLFRGAVPPVVSFNLGSLGFLTSHNFDDYRQDLRQVIHGNNTRDGVYITLRMRLRCELFRKGKAVPGKVFDVLNEVVIDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKIPEDARSNAWVSFDGKRRQQLSRGDSVRIYMSQHPLPTVNKFDQTGDWFHSLIRCLNWNERLDQKAL 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2539 1032 FunFam NAD kinase 2, chloroplastic 714 874 - -
Dere05g2539 1032 FunFam NAD kinase 2, chloroplastic 859 999 - -
Dere05g2539 1032 Gene3D - 714 1024 IPR017438 -
Dere05g2539 1032 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 292 395 IPR029021 -
Dere05g2539 1032 Pfam ATP-NAD kinase N-terminal domain 761 845 IPR002504 GO:0003951|GO:0006741
Dere05g2539 1032 PANTHER NAD KINASE 333 1032 - -
Dere05g2539 1032 Hamap NAD kinase [nadK]. 725 1023 IPR002504 GO:0003951|GO:0006741
Dere05g2539 1032 Gene3D - 859 999 IPR017437 GO:0003951|GO:0019674
Dere05g2539 1032 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 727 1027 IPR016064 -
Dere05g2539 1032 Pfam ATP-NAD kinase C-terminal domain 879 1005 - -
Dere05g2539 1032 Gene3D Protein tyrosine phosphatase superfamily 286 409 IPR029021 -
Dere05g2539 1032 MobiDBLite consensus disorder prediction 469 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2539 Dere-ChrDere05 35877946 35884780 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2539 05 35877946 35884780 Dere04g1077 04 11552309 11558447 CCT