Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g1077 ATGGTACCATGTCCCTGCACGTGCCACATGGCATTCTCCGTCGACATGAATCTTACTCCTCCGCCGGTGACCGGAGTAATCTCACCTTCATATCTTTATTTCTTCAAGCCTTCTAGGTCGTTAGGCAATGGCAGATTCTTGGGTTTCGAGTTTCAGAGGAAAGTAAGGCTACGGAGACAGCTCAAGTTTGTTATCAGTGCGGAGCTTTCCAACTCATTTTCCTTAAATTTTGGATTGGATTCTCAGAGCTTAAATTCCTTCCAATCCCATGAACCATCACAGTTGCCTTGGATGGGACCAATTCCAGGCGATGTTGCTGAAGTAGAAGCATATTGTAGGATCTTTAGGGCTTCCGAAAGGCTTCATTCAGCATTAATGGATGCATTATGCAACCCAATGACTGGTGAATGTAGTGTCTCATATGAGGTCCCATCAGATGAGAAACCACAGCTGGAAGATAAATTAGTCTCTGTCCTCGGATGCATAGTTTCCCTTGTGAATGAAGGCAGGGAGGATGTTCTTTCTGGAAGATCCTCAATTATGAATCCCTTTCGCGTTGCAGAAGTTGATGCAATGGAGGATAAGCTTCCCCCGCTTGCCATTTTTAGGAGTGAGATGAAAAGGTGTTGTGAGAGCTTGCATGTAGCTCTTGAGAATTATTTGACACCTGGTAATAATCGAAACTTGGATGTATGGAGGAAACTTCAGAGATTGAAGAATGTCTGCTATGATTCTGGCTTTCCTCGCAGGGAGGATGATCCTTGCCATACACTTTTTGCAAATTGGAGTCCTGTATATTTATCCACTTCTAAAGAGGAGAAAAAATTTAACTCTGAAGCAGCTTTTTGGACAGGTGGTCAGGTGACAGAGGAAGGACTGAAGTGGTTACTGGATCAAGGATATAAAACTATCATAGATCTCAGAGCAGAGACTGTCAATGACAACTTCTATCAAGCAGCCGTGCATGATGCTATTGCATCTGGGAAAATTGAAGTGGTTAAAATTCCTGTTGAAGTTAGGACTGCACCTACAATGGAACAGGTTGTCAGGTTTGCATCTTATGTTTCAGATTACGGTAAAAGGCCTATCTATCTTCACAGCAAGGAGGGGGTTTGGAGAACATCTGCCATGGTCTCTCGGTGGAGGCAGTACATGACTCGCTCTGCATCTCAGTTTGTTTCTAATCAAGCAGTAACTTCTGATGACATGTTATCACATTATACAAATATATATGGGAAGCTGAAGGAATCTTCAATGACTGCAGAGAGATCCTCTCTGGACAAGGATATTGATTCAGTACCAAAGTTGGGTGCAACATGTGATAGAAGTACCTCTCCAAAGTATGATGACCACAAAATGCAAAGTAGTGTAACCTTAAAGGGATTAACTAGTGATGGTGGCTCACTGTCAGAAGCCACAACTGCTGCGAATGGTGTAGGATCTTTTTCAGGTTTCTCCGACAACGCTAATCCTCTAAAAGCTCAGGTTCCTCCCTGTGATATATTTTCCAAAAAGGAGATGTCCAGCTTTTTGAGAAGTAGGAAGATCTCACCACACTCTTTATTTGACTATCAGATTAAAAGATTGGAATGTTTGCCAGATTCAAGGAGCAGGTATACTGGAGGATTGCAGGGAGGTGTGATCATCAGCAGTGGTTATAATCCTGTACCCAAAATTATGAGTCCAGGAAGTTCCAATGGGTCAGCTCATGTGGATTGTCTATCTGGGGAGCCCCAGACTAAAGATGGTAGCAATTCTAAGTTAGTGAATGGCAGCACTTCTAATTATGTAACAACAATAAATGGATTTAGTGAAGGAAAAATGTATTCCATGACTAATACCTGTGTCTCTTCTGCTGTGAACAATAACTCTGATTATGTCACAAATAAATCTCAAAGACTTGGAGATGGCAGGGATGAGGCTGGGATAGTCTTACATGATGAAGACTCAGGACCTGTTGACGGGGATATGTGTGCATCTTCAACAGGTGTTGTAAGGGTGCAGTCAAGAAAGAAAGCAGAGATGTTTCTAGTACGAACTGATGGGTTTTCTTGTGCCAGGGAAAAAGTGACTGAATCTTCTTTGGCTTTCACTCACCCTAGCACCCAGCAACAGATGCTTATGTGGAAATCTATGCCAAAGACTGTATTATTGTTGAAAAAGCTGGGGGAAGAACTGATGGAAGAAGCTAAACAGGTTGCTTCTTTTTTATATTACCAAGAGAAAATGAACGTTCTTGTGGAACCTGATGTGCATGATCTATTTGCTAGGATTCCAGGGTTTGGATTTGTTCAGACCTTCTATAGTCATGATACCAGTGACCTACATGAAAAAGTGGATTTCGTGGCATGTTTAGGGGGAGATGGTGTTATACTTCATGCTTCAAATATATTTAGGAATGCTGTTCCCCCTGTTGTATCATTTAACCTTGGCTCCCTTGGTTTTCTAACATCTCACCATTTTGAAGACTACATGCAGGACTTACGACAAGTCATCCATGGAAATAATACACGTGATGGTGTATACATCACTCTCAGAATGCGTCTTCGATGTGAACTTTTTCGTAAGGGTAATAAAGTGCCTGGGAAAGTAATTGATGTTCTTAATGAGATTGTTGTTGATCGGGGCTCTAATCCATACCTTTCAAAGATAGAATGTTACGAACATGATAGACTTATAACCAAGGTACAAGGTGATGGAGTCATCGTGGCTACCCCAACAGGAAGTACTGCCTATTCTACTGCTGCTGGAGGTTCCATGGTACATCCAAATGTGCCTTGCATGCTATTTACCCCAATCTGTCCACATTCACTCTCATTTAGACCGGTTATACTTCCAGATTCTGCCCGACTTGAATTAAAGATTCCAGAAGATGCAAGAAGCAGTGCATGGGTTTCATTTGATGGTAAGAGAAGGCAGCAGCTCTCAAGAGGAGATTCTGTTCGAATATCTATGAGTCAGCATCCACTTCCCACTGTTAATAAATTTGACCAAACTGGTGATTGGTTTCGTAGCTTAATTCGCTGTCTAAATTGGAATGAAAGGCTTGATCAGAAGGCTTTATAA 3066 0.4194 MVPCPCTCHMAFSVDMNLTPPPVTGVISPSYLYFFKPSRSLGNGRFLGFEFQRKVRLRRQLKFVISAELSNSFSLNFGLDSQSLNSFQSHEPSQLPWMGPIPGDVAEVEAYCRIFRASERLHSALMDALCNPMTGECSVSYEVPSDEKPQLEDKLVSVLGCIVSLVNEGREDVLSGRSSIMNPFRVAEVDAMEDKLPPLAIFRSEMKRCCESLHVALENYLTPGNNRNLDVWRKLQRLKNVCYDSGFPRREDDPCHTLFANWSPVYLSTSKEEKKFNSEAAFWTGGQVTEEGLKWLLDQGYKTIIDLRAETVNDNFYQAAVHDAIASGKIEVVKIPVEVRTAPTMEQVVRFASYVSDYGKRPIYLHSKEGVWRTSAMVSRWRQYMTRSASQFVSNQAVTSDDMLSHYTNIYGKLKESSMTAERSSLDKDIDSVPKLGATCDRSTSPKYDDHKMQSSVTLKGLTSDGGSLSEATTAANGVGSFSGFSDNANPLKAQVPPCDIFSKKEMSSFLRSRKISPHSLFDYQIKRLECLPDSRSRYTGGLQGGVIISSGYNPVPKIMSPGSSNGSAHVDCLSGEPQTKDGSNSKLVNGSTSNYVTTINGFSEGKMYSMTNTCVSSAVNNNSDYVTNKSQRLGDGRDEAGIVLHDEDSGPVDGDMCASSTGVVRVQSRKKAEMFLVRTDGFSCAREKVTESSLAFTHPSTQQQMLMWKSMPKTVLLLKKLGEELMEEAKQVASFLYYQEKMNVLVEPDVHDLFARIPGFGFVQTFYSHDTSDLHEKVDFVACLGGDGVILHASNIFRNAVPPVVSFNLGSLGFLTSHHFEDYMQDLRQVIHGNNTRDGVYITLRMRLRCELFRKGNKVPGKVIDVLNEIVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKIPEDARSSAWVSFDGKRRQQLSRGDSVRISMSQHPLPTVNKFDQTGDWFRSLIRCLNWNERLDQKAL 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g1077 1021 FunFam NAD kinase 2 chloroplastic 274 408 - -
Dere04g1077 1021 Pfam ATP-NAD kinase C-terminal domain 868 994 - -
Dere04g1077 1021 Hamap NAD kinase [nadK]. 714 1012 IPR002504 GO:0003951|GO:0006741
Dere04g1077 1021 Gene3D - 703 1013 IPR017438 -
Dere04g1077 1021 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 717 1016 IPR016064 -
Dere04g1077 1021 Gene3D - 848 988 IPR017437 GO:0003951|GO:0019674
Dere04g1077 1021 FunFam NAD kinase 2, chloroplastic 848 988 - -
Dere04g1077 1021 PANTHER NAD KINASE 321 1021 - -
Dere04g1077 1021 MobiDBLite consensus disorder prediction 564 589 - -
Dere04g1077 1021 Pfam ATP-NAD kinase N-terminal domain 737 834 IPR002504 GO:0003951|GO:0006741
Dere04g1077 1021 FunFam NAD kinase 2, chloroplastic 703 857 - -
Dere04g1077 1021 Gene3D Protein tyrosine phosphatase superfamily 276 412 IPR029021 -
Dere04g1077 1021 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 282 392 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g1077 Dere-ChrDere04 11552309 11558447 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2539 05 35877946 35884780 Dere04g1077 04 11552309 11558447 CCT