Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2438 ATGGAAAAGGAGGTTGGGGAAACACATGGAGCACATTCTCAAGCTGTTGAAAAGCAGAGAGGAGACAAATTAACAGTTCAGACTGAAAATTTAGGTAAACCATTGGATGAGGTGAAAACTCAAAATATTGCCCGTGATGATTTAGACAATGGACAAGATGATATATCTATCAGGACAACTGAGATAGCAGACTTAAAGTCTAATACTTTTGAGGAAATGGCAGATAATGTGGTTGGAAAATCTGATGTTGCTTGGAGGATTGATGAGAGTAAGGATTTGCAATGTAGATCTCAACAAGAAAATTTACAAACCAGTACTGCACTAGCTGACTACTGTCACAAGGTGCCTGAGAGTGCTGTAATACAATCTGAAACTCAAAACGAACTTGTCAATATTGTTAAACAAGATTACATGAGTTACAAGGTGGATGGGAATGGAGATTCAGGGTCTAATATCCAAGAAGGCAGTGTAGATAGCAAATCTCACCAGGATAATTTGGCTAAAGAGACGGAAGATAATAGGAACCTAGAAATAACACAAATAAATGAAGAGGCTGATGAATTCCCAGGTGAGGACAGTAATTTGGAGCCTGTATTTGATGGAACAGAGGATTCTGGGATGGAAGCTAGCAGTAGCAAATCTACCCATTCTTTGGAAGCTGATCAGGAGAATCAGGGTGTAGTTGAGAAGGCAGTGGCATTTAAAAATATCGTGAGGCAGAAAAGCACAGTAGCAGTCTCCACTCTTCTGCGTCACCTTTCAGGCAAAAGGGGTGAAGGTTCTATGTGCATTCCAGTTCATAAAGGTAAGGATGTTTCAGACTCATTAAAAGACAAAGAATCGAAACAGATTTTGGAGAAGGCAGGGAAGATTCATGCTTTGAATCCCCTAAATTCTATTAAGGTGTCATCTTATGTTAACATGGAAAACAAAATTGAAGGGCCTCCACAACCCATAGCTATGAAGGGAAGGGTTATACTGTACACAAGGCTACGATGCCAAGAATGTAAAGAGGCTAGGCGTTTTTTGTACATGAAAAGGCTCAGATATGTTGAAATCAACATTGATGTGTACCCTAGTAGAAAGCTGGAGCTGGAAAAGATTTCTGGTACTGCTTCTGTCCCGAAGGTATTTTTCAATGAAATACTTATTGGAGGCTTGAGTGAGCTAAAGGCCTTGAATGAGTCTGGCAAGCTTAACGAGAAGATTGACTTTCTCATTATTGAAGCACCGTCATTTGAAGCACCGTTACCACCTCTTTCTGGAGAGGATGATGTGTCAAGTAGTGGAGCTCCAGATGAAATGGCTTTAATTGTTCGCAAAATGAAAGAATCTATTGTTGTGAAGGACCGATTCAGCAGAATGCGTAGGTTCACTTCCTGTTTTCTTGGCTCAGAAGCTGTGGACTTTTTATCAGAGGATCAATATTTGGAAAGACAAGAGGCTGTTGAATTTGCACGAAAGCTTGCAAGCAAACTCTTCTTTCAGCATGTTCTTGACGAGAATCTATTTGAAGATGGTAATCACTTGTATCGGTTTTTAGATGATGATCCAATTGTGGCATCTCAGTGTCACAACATTCCAAGGGGCATAACTACTGTGAAGCCCAAGCCCATAGCAGAAATTGCATCAAGGCTTAGGTCTCTGTCCTATGCAATGTTTGAAGCCTATGTTTCTGAAGATGGATGTCATATTGATTACAGAAGTATCCACGGAAGTGAGGAATTTGCAAGGTATCTGAGAATAGTCGAGGAACTCCAAAGAGTGGAAATATGGGAGATGTCTAGAGAAGAAAAACTTGCTTTCTTTATTAATCTTTATAATATGATAGCTATCCATGCAATTTTAGTATGGGGTCATCCAGCTGGAGCACTGGATAGAAGGAAATTGTTTGGAGACTTCAAATATGTCATCGGTGGGTACACCTACTCACTTTCATCTATTCAGAATGGCATTTTGAGGGGAAACCAGCGACCACCATATAACCTTATGAAGCCATTTGGTGCAAAAGATGAACGTTCAAGGGTTGCTCTCCCTTATCCCGAGCCTCTTATTCATTTTGCTTTAGTTTGTGGTACCCGATCTGGCCCTGCGCTTCGATGCTATTCCCCTGGAGACATTGACGAAGAATTAACGGATGCGGGCCGCAAATTCTTAAGAAGTGGAGGGCTAACAATTGATTTGAATGCCAAGGTTGCATATGCCAGTAAGATCCTTAAGTGGTTTAGTTCAGATTTTGGCAATAACGAGGTGGAGGTGCTGAAGCATGTGTCCAATTATTTAAGTCCAGCTGACTCAACAGCATTATTGGACCTGCTCGCCACTTCTGAGTTGAAGGTTATGTATCAGATTTTTGACTGGGGTTTGAACTGTTAG 2376 0.4087 MEKEVGETHGAHSQAVEKQRGDKLTVQTENLGKPLDEVKTQNIARDDLDNGQDDISIRTTEIADLKSNTFEEMADNVVGKSDVAWRIDESKDLQCRSQQENLQTSTALADYCHKVPESAVIQSETQNELVNIVKQDYMSYKVDGNGDSGSNIQEGSVDSKSHQDNLAKETEDNRNLEITQINEEADEFPGEDSNLEPVFDGTEDSGMEASSSKSTHSLEADQENQGVVEKAVAFKNIVRQKSTVAVSTLLRHLSGKRGEGSMCIPVHKGKDVSDSLKDKESKQILEKAGKIHALNPLNSIKVSSYVNMENKIEGPPQPIAMKGRVILYTRLRCQECKEARRFLYMKRLRYVEINIDVYPSRKLELEKISGTASVPKVFFNEILIGGLSELKALNESGKLNEKIDFLIIEAPSFEAPLPPLSGEDDVSSSGAPDEMALIVRKMKESIVVKDRFSRMRRFTSCFLGSEAVDFLSEDQYLERQEAVEFARKLASKLFFQHVLDENLFEDGNHLYRFLDDDPIVASQCHNIPRGITTVKPKPIAEIASRLRSLSYAMFEAYVSEDGCHIDYRSIHGSEEFARYLRIVEELQRVEIWEMSREEKLAFFINLYNMIAIHAILVWGHPAGALDRRKLFGDFKYVIGGYTYSLSSIQNGILRGNQRPPYNLMKPFGAKDERSRVALPYPEPLIHFALVCGTRSGPALRCYSPGDIDEELTDAGRKFLRSGGLTIDLNAKVAYASKILKWFSSDFGNNEVEVLKHVSNYLSPADSTALLDLLATSELKVMYQIFDWGLNC 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2438 791 ProSiteProfiles DEP domain profile. 442 515 IPR000591 GO:0035556
Dere05g2438 791 MobiDBLite consensus disorder prediction 1 52 - -
Dere05g2438 791 CDD DEP 438 512 - -
Dere05g2438 791 Gene3D - 432 520 IPR036388 -
Dere05g2438 791 MobiDBLite consensus disorder prediction 144 223 - -
Dere05g2438 791 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 446 513 IPR000591 GO:0035556
Dere05g2438 791 SUPERFAMILY "Winged helix" DNA-binding domain 435 523 IPR036390 -
Dere05g2438 791 MobiDBLite consensus disorder prediction 1 24 - -
Dere05g2438 791 ProSiteProfiles Glutaredoxin domain profile. 313 410 - -
Dere05g2438 791 Pfam Protein of unknown function, DUF547 593 719 IPR006869 -
Dere05g2438 791 MobiDBLite consensus disorder prediction 144 160 - -
Dere05g2438 791 MobiDBLite consensus disorder prediction 205 222 - -
Dere05g2438 791 MobiDBLite consensus disorder prediction 161 181 - -
Dere05g2438 791 Pfam Glutaredoxin 325 381 IPR002109 -
Dere05g2438 791 SUPERFAMILY Thioredoxin-like 320 403 IPR036249 -
Dere05g2438 791 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 89 791 - -
Dere05g2438 791 SMART DEP_3 442 515 IPR000591 GO:0035556
Dere05g2438 791 Gene3D Glutaredoxin 320 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2438 Dere-ChrDere05 34896654 34903609 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2438 05 34896654 34903609 Dere04g0955 04 10154412 10159120 CCT
Dere05g2438 05 34896654 34903609 Dere05g2438 05 34896654 34903609 ECH