Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0955 ATGGAGTTAGTGAAGACAACTGAATCAAATTCTCAAGCTGTTGAAAAGCTGGAAGGAGATGCTTCCACCGTTTGGAATGAAAAGGGTAATCCGCTTGAAGAGGTAAAGAATCAAAATATTGGCAGTGATGGTCCCAAGTTAGACAATAGTCAAGATGATATATCTGACAAGAAAAATGACATGGCAGATGTGCATGAGAGTGATGTCATGAAGTCTGAAACTTTAGATGAATTTGTCAATAATGTCAAGCAAGAATCCTCCGGTGATAATGTTGATGGCAGTATAGATTCTGAGTTTACAAGTCAAGAAGGAATTGTAGATAAAAGTTCTGGACAGAATGACTTTGCTATAGATATGAACGAGAGTGAGAACATAGAACCCACACTACTGAATCAGAAAGCAGATGAAATTCCAAGTGAGGACAATAATCTAGAGCCTGTGTTTGATGGAACAGAGGTTCCTGGGATGGAAACTGGAAGAAGCACGTATAATGGTTCTTTGGATGCTGATCCAGAGACTCAGGGTGTGGTTGACAAGGCAGTGGCACTTAAAAACTTTGTTAGGGAGAAGAGTGCTGTAGCTGTCTCTACTGTGCTGCGTCGCTTTTCTGGAAAAGGTGATGAAGGTTCCATGAGCAATTCTGAAGATGAAAGTAAGAATGTTTCAGAATCCTCAAAAGACATGGATTCTAGAGATATTATTGAGAAAAAATTTGCATGGAACCCTTTAAATTATATTAGGATGTCATCTGATGCTGATTTGGGAGACAAAAATGAACGGGGGGAACCAATAGTCGAAGGTCCACAACATCCCATAGCCATGAAAGGGAGGATTATACTCTACACAAGACTAGGGTGCCAGGAATCTAAAGAGGCTAGGCTTTCTTTGTATATGAAACGGCTTAGATATATTGAAATCAACATTGATGTGTACCCCAGTAGAAAGCAGGAGCTGGAGAAGATTTCTGGATCTTCCTCTGTTCCCAAGGTGTTCTTCAATGAAATACTTATTGGAGGTTTGAATGAGCTAAAGGCCCTGAATGAGTCTGGTAAGCTTGATGAGAAGATTGAATTTCTTGTTAATGAAGCACCGTCAATTGAAGCTCCATTACCGCCTCTTTCTGGAGAGGATGATGAGTCTAGTAGTGGAGCTCTTGATGAAATGGCTTTAATTGTCAGCAAAATGAAAGAAGTTATTGTTGTGAAGGACCGATTTTACAAAATGCGGATGTTTACTAACTGCTTTCTTGGCTCGGAAGCCGTGGACTTTTTATCAGAAGATCAATACCTGGAAAGACAAGAGGCTGTTGAGTTTGCGCGAAGTCTTGCCAGCAAATTCTTCTTTCAACATGTTCTTGACGAGAATCTATTTGAGGATGGTAATCACTTGTATCGATTTTTGGATGACGATCCTATTGTGGCTTCGCAATGTCAAAATATTCCGAGGGGTATAACCACTGTGAAACCCAAGCCTATAGTAGAAATTGCATCGAGGCTGAGGTTTCTGTCTTATGCTACAATTGAAGCCTATGTCTCTGAAGATGGACATCATGTTAATTACAGAAGTCTCCATGGAAGCGAGGAGTTTGCAAGGTATCTGAGAATAGTCGAGGAGCTTCAAAGAGTGGAAATATGGGATATGCCTAGAGAAGAGAAGCTAGCTTTCTTTGTCAATCTTTACAATATGATGGCCATCCATGCAATCTTAGTACGGGGTCATCCAGCTGGAGCACTGGAAAGAAGGAAATTGTTTGGAGACTTCAAATATGTGATTGGTGGGTCCACCTACTCACTTTCAGCTATTCAAAATGGCATTTTGAGGGGAAACCAGCGGCCACCTTATAATCTTATGAAGCCATTTGGTGCAAAAGATAAACGTTCAAGGGTGGCTCTCCCATACCCTGAGCCCCTTGTTCATTTTGCTTTAGTTTGTGGTACCAAATCTGGACCTGCACTTCGATGTTATTCTCCTCGAGATATTGACAAAGAATTAATGGATGCTGCCCGCAATTTCTTAAGAAGTGGAGGAGTTGTCATTGATTTGAATACAAAGATTGCATATGCTAGTAAGATCCTGAAGTGGTTTAGTATAGATTTTGGCAAGAACGATGTAGAGGTGCTGAAGCATGTGTCAAACTACTTAGATCCAGCTGACTCGGCAGTATTATTGGACCTGCTTGCCACTTCCGAGTTGAAGGTGATATATCACCCGTATGACTGGAGTTTGAACTGCTAG 2235 0.4098 MELVKTTESNSQAVEKLEGDASTVWNEKGNPLEEVKNQNIGSDGPKLDNSQDDISDKKNDMADVHESDVMKSETLDEFVNNVKQESSGDNVDGSIDSEFTSQEGIVDKSSGQNDFAIDMNESENIEPTLLNQKADEIPSEDNNLEPVFDGTEVPGMETGRSTYNGSLDADPETQGVVDKAVALKNFVREKSAVAVSTVLRRFSGKGDEGSMSNSEDESKNVSESSKDMDSRDIIEKKFAWNPLNYIRMSSDADLGDKNERGEPIVEGPQHPIAMKGRIILYTRLGCQESKEARLSLYMKRLRYIEINIDVYPSRKQELEKISGSSSVPKVFFNEILIGGLNELKALNESGKLDEKIEFLVNEAPSIEAPLPPLSGEDDESSSGALDEMALIVSKMKEVIVVKDRFYKMRMFTNCFLGSEAVDFLSEDQYLERQEAVEFARSLASKFFFQHVLDENLFEDGNHLYRFLDDDPIVASQCQNIPRGITTVKPKPIVEIASRLRFLSYATIEAYVSEDGHHVNYRSLHGSEEFARYLRIVEELQRVEIWDMPREEKLAFFVNLYNMMAIHAILVRGHPAGALERRKLFGDFKYVIGGSTYSLSAIQNGILRGNQRPPYNLMKPFGAKDKRSRVALPYPEPLVHFALVCGTKSGPALRCYSPRDIDKELMDAARNFLRSGGVVIDLNTKIAYASKILKWFSIDFGKNDVEVLKHVSNYLDPADSAVLLDLLATSELKVIYHPYDWSLNC 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0955 744 MobiDBLite consensus disorder prediction 1 69 - -
Dere04g0955 744 MobiDBLite consensus disorder prediction 1 17 - -
Dere04g0955 744 MobiDBLite consensus disorder prediction 83 112 - -
Dere04g0955 744 MobiDBLite consensus disorder prediction 203 228 - -
Dere04g0955 744 CDD DEP 391 465 - -
Dere04g0955 744 SUPERFAMILY "Winged helix" DNA-binding domain 399 476 IPR036390 -
Dere04g0955 744 MobiDBLite consensus disorder prediction 133 154 - -
Dere04g0955 744 SUPERFAMILY Thioredoxin-like 275 357 IPR036249 -
Dere04g0955 744 SMART DEP_3 394 468 IPR000591 GO:0035556
Dere04g0955 744 Gene3D - 386 514 IPR036388 -
Dere04g0955 744 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 400 466 IPR000591 GO:0035556
Dere04g0955 744 ProSiteProfiles Glutaredoxin domain profile. 266 363 - -
Dere04g0955 744 MobiDBLite consensus disorder prediction 49 69 - -
Dere04g0955 744 Pfam Protein of unknown function, DUF547 546 672 IPR006869 -
Dere04g0955 744 ProSiteProfiles DEP domain profile. 395 468 IPR000591 GO:0035556
Dere04g0955 744 MobiDBLite consensus disorder prediction 210 228 - -
Dere04g0955 744 Pfam Glutaredoxin 278 334 IPR002109 -
Dere04g0955 744 Gene3D Glutaredoxin 273 358 - -
Dere04g0955 744 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 32 744 - -
Dere04g0955 744 MobiDBLite consensus disorder prediction 32 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0955 Dere-ChrDere04 10154412 10159120 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2438 05 34896654 34903609 Dere04g0955 04 10154412 10159120 CCT
Dere04g0955 04 10154412 10159120 Dere04g0955 04 10154412 10159120 ECH