Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2416 ATGACGAACAAGTCACGACGCCCATATGCGATCAACGACCCAGATTCACTCCTGGGTTTTACGCTCTTGTTTTATGTTCCCCAAGTTCCAGTGTTTTCTACTTTGTTCACCGCCAACCTTCCCTGGCTTTCAGAGTCAGATCGACTCATACCACCAGAAGCGGTTGTATTAGTAGCTCTCTGCTGTGGTGATCCAACAGAAGAAGGAGAGGGCAAGATGTTGCTGGGGAAGAGACCTCGTCCTCCGATGAAGAGAACCACAAGCCTGTCAGAAATAACCTTGGATCCCAATACCACCACCGATGTCCCACCCCTCGATTCCAATAACCCCTTCAACCGCCAGAGAGGCGGTGGCGGTGGCCCCTTGAAAATACCCGCTGGCTTCAGTAATGGGTCAGATCAGAGGGCGTCAGCTGGCGCCACCGTCTCATCCTCAAACCATCGAAGGCATTCCGTAGATTTCAATCACACCTCTGACTTCTTGCGTTCTTGCTCTCTCTGCAAACGTCCCTTGGCACCCGCCCGTGACATCTACATGTACAGAGGTGATAGTGCTTTCTGCAGTCTAGAATGTCGTCAGCAGGCGATGAATCAGGATGAGAGGAAGGAGAAGGGTTCATGGAAGTCAAAGAAAAAAGTTGTGGCTCCTTCTGCTGGATCTCATGTTCCCACTAATGGCGAGACCGTGGCTGCCTTGTAA 699 0.5136 MTNKSRRPYAINDPDSLLGFTLLFYVPQVPVFSTLFTANLPWLSESDRLIPPEAVVLVALCCGDPTEEGEGKMLLGKRPRPPMKRTTSLSEITLDPNTTTDVPPLDSNNPFNRQRGGGGGPLKIPAGFSNGSDQRASAGATVSSSNHRRHSVDFNHTSDFLRSCSLCKRPLAPARDIYMYRGDSAFCSLECRQQAMNQDERKEKGSWKSKKKVVAPSAGSHVPTNGETVAAL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2416 232 ProSiteProfiles Zinc finger FLZ-type profile. 159 203 IPR007650 -
Dere05g2416 232 MobiDBLite consensus disorder prediction 93 114 - -
Dere05g2416 232 Pfam zinc-finger of the FCS-type, C2-C2 155 202 IPR007650 -
Dere05g2416 232 PANTHER FCS-LIKE ZINC FINGER 5 73 214 - -
Dere05g2416 232 MobiDBLite consensus disorder prediction 93 148 - -
Dere05g2416 232 MobiDBLite consensus disorder prediction 130 148 - -
Dere05g2416 232 MobiDBLite consensus disorder prediction 198 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2416 Dere-ChrDere05 34548467 34549399 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2416 05 34548467 34549399 Dere04g0934 04 9799219 9799934 CCT
Dere05g2416 05 34548467 34549399 Dere05g2416 05 34548467 34549399 ECH