Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0934 ATGTCGTTAGGGAAGAGACCCCGTCCACCAATGAAGAGAACCACAAGCATGTCGGAGATGACCTTCGATCTGAATGCTACCCCCGATGTTCCACCGGCCGATCCTACTAATCCTCCTAACCCTAACCCTAACCCTGATAGGCTGAGACCCTCTGATGCTTCACGCAAACACCCAGCTGCCTCCGATTGGTTGGATCAGAGGGTGTCGCCCGCAATCCATAGAAGGCATTCCGGCGATTTCGTAGAGACCACTGACTTCCTTCGTGCTTGCTTTCTCTGCAAACGTCGACTGGTACCCAGTCGAGACATCTACATGTATAGGGGTGATAGTGCTTTCTGCAGTATAGAATGTCGTCAACAGCAGATGATTCAGGATGAGAGGAAGGAAAAGCGTTGTGTGGCATCCAATAAACAAGTAGTGGCTCCGCCTTCTGGATCTCAGGTTGCCACCAAAGGCAAAAGCGTGGCTGCTTTGTAA 477 0.5115 MSLGKRPRPPMKRTTSMSEMTFDLNATPDVPPADPTNPPNPNPNPDRLRPSDASRKHPAASDWLDQRVSPAIHRRHSGDFVETTDFLRACFLCKRRLVPSRDIYMYRGDSAFCSIECRQQQMIQDERKEKRCVASNKQVVAPPSGSQVATKGKSVAAL 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0934 158 MobiDBLite consensus disorder prediction 31 46 - -
Dere04g0934 158 ProSiteProfiles Zinc finger FLZ-type profile. 85 129 IPR007650 -
Dere04g0934 158 MobiDBLite consensus disorder prediction 1 66 - -
Dere04g0934 158 Pfam zinc-finger of the FCS-type, C2-C2 79 128 IPR007650 -
Dere04g0934 158 PANTHER FCS-LIKE ZINC FINGER 5 2 148 - -
Dere04g0934 158 MobiDBLite consensus disorder prediction 49 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0934 Dere-ChrDere04 9799219 9799934 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2416 05 34548467 34549399 Dere04g0934 04 9799219 9799934 CCT
Dere04g0934 04 9799219 9799934 Dere04g0934 04 9799219 9799934 ECH