Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2401 ATGGCAGGGAAAGCTAAAAGCAAGGTAGGAAATGAATTGGGTTGTGGCTTTATGGGGAGTATTTTCCTCCTCAGAAGCTATAGGCTGAGAAAATCAACTGTCCATTCATTACCAATGAAAGCTACCAACATTGTGCAGAGCGATGAGAGCAAAAACGAATCCAAAACGCCAACAAATCATAAATCCAAGGGGCCACGAAATATCCTCACCGAGTCCCACAAACAGGATTCGGATCAGAAACGTCCCAGAAAGAGCACCTCCGGTCACCGGAGACCTTCAGATGCTGCCAGAAGCTCAACATCATCCTCCGGTAATTCAACCCATACAAAGAATGATGAGAACAAATTACAGAGAGAGCCCGTCGAAAATTCTCTGGAGCTCGCTAGGATAAGTACTAGTCGCCAGCGTGACAACGAGAATAAAGTCTTGGTTAACTTGAAACTTACTGGGAATTTGCTTGCAAATAACAGCCCAAGAATTAGTGGTGCCAAGAAAATAGAATGCGTTCCCAAGAGTAGAGAGTTGAATTCTATGACTAATTCTTACAATAACGCCGGCATGGGAAACATCATGAGGAAGAACAGCGATGAGCTGGCGCAATTCCGGAGTCCGAGGAACAGAGTAGACCCTGAGGCGTTGAAGACAATGGGAAATGAAGCCTACAAGCAGGGGAAATTCGAAGAGGCTTTGGGTCTGTATAACCGAGCCATTCAGCTTGATTCAAATAAGGCAACGTATCATTGCAATAAGAGTGCAGCTTTAATGGGCTTAGGCCGCCTTCTGGAAGCATTGGTTGAATGCGAGGAAGCTATTCGTCTGGAACCTTCTTATATAAGAGCTCACCAGCGTTTGGCAACCATATATCTCAGACTGGGGGAAGCAGAAAGGGCGATGAATTGCAATAACACAACCTCATATGGGGATACCATACTCACTTTCCAAGCTCAGGCTCTCCAAGATCACCTTAAAAAATGCATCGAAGCTCGGAAAGCAAATGAGTGGAACACTATACTAAAGGAAACACGGTCTGCAATATCACTGGGTGCTGATTCAGCTCCGCAGGTGTATGCTCTACAAGCAGAAGCCTTATTGAAGCTCCTGAAACATGAAGAGGCATATTCTAACTACGAAAAAATGCCCAAATTCGAACTTGAATGGTGTATGAAGCTTTTTGGCTCACCTCGTACTGCTTACTCGTTGATGATAGGCGCTCAGGTTTACTTGGCAGCCGGCAGGTTCGACGATGCTGTAACAGCCGCTCAGCAAGCGGCTGAACTTGATGCAAGCAACAAAGAGGTGAATGCAGTGGTAAGAAGGACGAGAGCAGTGAGATCAGCGAGAATGAGTGGAAATTTTCTGTTCAAGGCATCAAAGTTTATGGAAGCATGTGGGATGTACAACGAAGGGCTAGAGTATGATCCATTCAACTCAGTTCTGCTATGCAATAGAGCAGCATGTCGCTCTAAGCTTGGGCAGTTCGAGAAAGGAATTGAAGATTGTAACGCAGCGCTTGCAGTGCAGCCTTATTACAGCAAGGCAAGGTTACGGAGGGCAGATTGCAATGCCAAGTTGGAAAGATGGGAAGCTGCCATTCAAGACTATGAAATGCTGATGAGAGAAAAGCCGGGAGATGAGGAGGTAGCAAGGGGTCTGTTTGAGGCCCAACTTCAACTCAAGATGCTAAGAGGGGAAGATACTAAAGACTTGAAATTTGGTTCCAATTTGGTTGCTATCTCAAGCAATGATCGCTTTAGACATTATGTGACCTCGCCTGGCATGTCCGTGGTTCTCTTTTGCAACAAGGCAACCCACAAGCAAGTATTGCTGGTATTGGAGCAAACCTGCAAGAGATTTCCATCCGTTAATTTCCTTAAGGTGGAGATTGAAGACCACCCCTACTTAGCAAAATCAGAAGGCTTGAGCTCTATCCCGGCCTTCAGAATATACAAGAATGGATCAAGGGTCAAAGAGATTCCAGGCAACAAACACGAGTTGTTAGAAAGATCAGTTAAATTGTATACTAGCTGA 2028 0.4527 MAGKAKSKVGNELGCGFMGSIFLLRSYRLRKSTVHSLPMKATNIVQSDESKNESKTPTNHKSKGPRNILTESHKQDSDQKRPRKSTSGHRRPSDAARSSTSSSGNSTHTKNDENKLQREPVENSLELARISTSRQRDNENKVLVNLKLTGNLLANNSPRISGAKKIECVPKSRELNSMTNSYNNAGMGNIMRKNSDELAQFRSPRNRVDPEALKTMGNEAYKQGKFEEALGLYNRAIQLDSNKATYHCNKSAALMGLGRLLEALVECEEAIRLEPSYIRAHQRLATIYLRLGEAERAMNCNNTTSYGDTILTFQAQALQDHLKKCIEARKANEWNTILKETRSAISLGADSAPQVYALQAEALLKLLKHEEAYSNYEKMPKFELEWCMKLFGSPRTAYSLMIGAQVYLAAGRFDDAVTAAQQAAELDASNKEVNAVVRRTRAVRSARMSGNFLFKASKFMEACGMYNEGLEYDPFNSVLLCNRAACRSKLGQFEKGIEDCNAALAVQPYYSKARLRRADCNAKLERWEAAIQDYEMLMREKPGDEEVARGLFEAQLQLKMLRGEDTKDLKFGSNLVAISSNDRFRHYVTSPGMSVVLFCNKATHKQVLLVLEQTCKRFPSVNFLKVEIEDHPYLAKSEGLSSIPAFRIYKNGSRVKEIPGNKHELLERSVKLYTS 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2401 675 Gene3D Glutaredoxin 568 674 - -
Dere05g2401 675 SUPERFAMILY Thioredoxin-like 562 665 IPR036249 -
Dere05g2401 675 MobiDBLite consensus disorder prediction 92 110 - -
Dere05g2401 675 SUPERFAMILY TPR-like 209 432 IPR011990 GO:0005515
Dere05g2401 675 ProSiteProfiles TPR repeat profile. 210 243 IPR019734 GO:0005515
Dere05g2401 675 MobiDBLite consensus disorder prediction 53 91 - -
Dere05g2401 675 Gene3D Tetratricopeptide repeat domain 208 562 IPR011990 GO:0005515
Dere05g2401 675 MobiDBLite consensus disorder prediction 45 124 - -
Dere05g2401 675 Coils Coil 517 537 - -
Dere05g2401 675 Pfam Thioredoxin 605 666 IPR013766 -
Dere05g2401 675 SUPERFAMILY TPR-like 447 559 IPR011990 GO:0005515
Dere05g2401 675 CDD TRX_family 584 667 - -
Dere05g2401 675 Pfam Tetratricopeptide repeat 489 544 - -
Dere05g2401 675 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 6 671 IPR044534 -
Dere05g2401 675 ProSiteProfiles TPR repeat region circular profile. 210 242 - -
Dere05g2401 675 SMART tpr_5 210 243 IPR019734 GO:0005515
Dere05g2401 675 SMART tpr_5 244 277 IPR019734 GO:0005515
Dere05g2401 675 SMART tpr_5 397 430 IPR019734 GO:0005515
Dere05g2401 675 SMART tpr_5 511 544 IPR019734 GO:0005515
Dere05g2401 675 SMART tpr_5 443 476 IPR019734 GO:0005515
Dere05g2401 675 SMART tpr_5 477 510 IPR019734 GO:0005515
Dere05g2401 675 Pfam TPR repeat 217 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2401 Dere-ChrDere05 34436051 34438691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2401 212 297 EF-hand Containing Proteins AT2G32450 30.233 4.82e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2401 05 34436051 34438691 Dere04g0921 04 9658133 9661017 CCT