Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2114 ATGCTCAAGCAATTTCTCAGTAAGCTTCCTCGGAAGTCATCCAAATCCGACTCAAACGAGTCAAATCGGGGCGATTCTTCACGTTCCAGCTGCTCGCAGGACACTTCAGCTAGCGTTACCGGTAGGAGTAATCGATCAAACGGTGGGAATTCTTCCAGTCGATCCAACACTGCCAAACGCACTTCTTCGTCGGCAGTTTTTCCGGCGAGCATCGTGTCTGGGATCGAACCCTTGGTTCCGTTCAAAGATGTACCCAATGCGGAGAAGATGAACCTCTTTGTGAGCAAACTGAGCCTCTGTTGTGTTACTTTCGATTTTACTGATCCCGGTAAAAATACTGTGGAGAAAGATGTCAAGAGGCAAACTTTGCTTGAGCTTGTCGAATTTGTGGCTTCTGGGTCGATGAAATTTAGTGAACATGCTATCTTTGCTATGTGCAAAATGTGTGCTATTAATCTCTTTAGAGTTTTGCCGCCTCATTATCGGTCAAATGGGGGTAGTGCTGGTGGCGAGAATGATGATGATGAGCCAACATTTGATCCTGCTTGGCCACATTTACAGATTGTGTACGACTTGCTGCTTAAATTTATTACGTCTTCTTGCCTTGACGCTAAGGTAGCGAAGAAATTCATCGACCATTCATTTATTTCGAAGTTGCTTGACTTGTTTGATTCAGAGGATCCAAGAGAAAGAGATTGCTTGAAGACAATTCTGCATAGGATTTATGGGAAGTTCATGGTGCATAGGCCATATATTAGAAAATCTTTTAACAATATATTTTACCGGTTTGTGTTTGAGACTGAGAAACATAATGGAATTGCTGAGTTATTGGAGATTTTTGGGAGCATTATTAGTGGGTTTGCTTTACCTTTGAAAGAGGAACACAAGATTTTCTTGTGGAGAGTTTTGATCCCCTTGCACAAGCCAAAATCTGTGGGGATTTATTTCCAGCAATTGTCCTACTGTGTCACACAGTTTATAGAGAAGGAGCCAAAGTTAGCAAGCACCGTGATAAGGGGTTTATTAAAATATTGGCCTATAACAAATAGTCAGAAAGAGGTGATGTTCTTGGGTGAACTGGAAGAGATTTTGGAAACAATCAACATGGTAGAGTTCCAAAGGGTGATGGTCCCATTGTTTTGGCGAATTGGGTGCTGCATTAACAGCTTACACTTCCAGGTAGCGGAAAGGGCCCTTTTCTTATGGAATAACGACCATATCGTCAACTTAATTGCTCATAATCGTCAGGTGATCCTTCCCATCATATATCCAGCTTTAGAGAGGAACTCTCAGAACCACTGGAACCACGCAGTGCTCAACTTAACTCTTAATATTAGAAAGATGTTCTTGGAGATGGATGAGAAGCTCTTCCTGTCTTGTCATTCCAATTTTAAGGAGGAAGAAGCAGCTCTAAGCTTAGCAGCCGAGCAGCGAAAGGAAGCATGGAAACGACTAGAGCATGCAGCCAGTCTGCAGCCTGTGATTGGGAATACCGCAGTCTTGGTGTCTCCTTAA 1515 0.429 MLKQFLSKLPRKSSKSDSNESNRGDSSRSSCSQDTSASVTGRSNRSNGGNSSSRSNTAKRTSSSAVFPASIVSGIEPLVPFKDVPNAEKMNLFVSKLSLCCVTFDFTDPGKNTVEKDVKRQTLLELVEFVASGSMKFSEHAIFAMCKMCAINLFRVLPPHYRSNGGSAGGENDDDEPTFDPAWPHLQIVYDLLLKFITSSCLDAKVAKKFIDHSFISKLLDLFDSEDPRERDCLKTILHRIYGKFMVHRPYIRKSFNNIFYRFVFETEKHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSVGIYFQQLSYCVTQFIEKEPKLASTVIRGLLKYWPITNSQKEVMFLGELEEILETINMVEFQRVMVPLFWRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIIYPALERNSQNHWNHAVLNLTLNIRKMFLEMDEKLFLSCHSNFKEEEAALSLAAEQRKEAWKRLEHAASLQPVIGNTAVLVSP 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2114 504 SUPERFAMILY ARM repeat 91 485 IPR016024 -
Dere05g2114 504 PIRSF PP2A_B56 2 501 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dere05g2114 504 MobiDBLite consensus disorder prediction 1 61 - -
Dere05g2114 504 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 85 488 - -
Dere05g2114 504 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 80 489 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dere05g2114 504 Gene3D - 85 488 IPR011989 -
Dere05g2114 504 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dere05g2114 504 MobiDBLite consensus disorder prediction 23 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2114 Dere-ChrDere05 31236087 31238732 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2114 05 31236087 31238732 Dere04g0609 04 6066853 6069481 CCT