Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0609 ATGCTCAAGCAATTCCTGAGCAAGCTTCCTCGGAAATCATCCAAATCCGACGGGGTTGAGTCATTTCGGGACGATTCTTCACGTTCCGGCTCCTCAGTGCATGCTTCACCACGCGTCACCGGCAGGGCTAATCGGTCAAACGGTGGGAGTGTTTCCACTCGATCCAATGCTGTGAAACGCACTTCTTCGTCGGCGGTGTTTCCAGCAAGCATCGTGTCTGGGATCGAACCCTTGGTGCCGTTCAAAGATGTGCCCAATGCGGAGAAGATGAACCTGTTTGTTAGCAAGTTGAGCCTTTGTTGCGTAACTTTCGATTTCACTGACCCCGGTAAGAATATCGGGGAAAAAGATGTAAAAAGACAAACTTTGCTTGAACTTGTCGATTTTGTCGCGTCTGGGTCGATGAAATTCAGTGAACCTGCTGTTCTTGCTATGAGCAGGATGTGTGCTATTAATCTCTTTAGGGTTTTCCCGCCTCAATGTAGGTCTATTGGGGGAGTTGCTGGTGGCGAGAATGATGATGATGAGCCAGTATTTGACCCTGCTTGGCCACATTTACAGATTGTGTATGAATTGTTGCTTAAATTTATTACTTCTCCGTGCCTTGATGCTAAGGTGGCGAAAAAGTATATCGACCATTCATTTATTTCTCGATTACTTGAATTGTTTGATTCAGAGGATCCAAGAGAAAGAGACTGCCTGAAGACTATTCTGCATAGGGTTTATGGGAAGTTCATGGTGTATAGGCCCTACATTCGAAAATCTATTAACAACCTATTTTACCGGTTTGTGTTTGAGTCCGAGAAACACTATGGCGTTGCTGAGTTATTGGAGATTTTTGGGAGCATAATTAGTGGGTTTGCCCTGCCTTTGAAAGAGGAACATAAAATCTTCTTATGGAGAGTTTTGATCCCCTTGCACAAGCCAAAATCTATGGGTGTTTATTTCCAGCAATTGTCATATTGCGTTACACAATTTGTAGAGAAGGAGCCGAAGCTGGCCAGCACTGTGATAAGGGGTTTGTTAAAATATTGGCCAATAACAAATAGTCGGAAGGAGGTGATGTTCTTGGGTGAGGTGGAGGAGATTTTGGAAGTAATCAACATGGTAGAGTTCCAGAGGGTCATGGTCCCGTTGTTTTGGCGGATTGGTTGCTGCATTAACAGCTTACACTTTCAGGTAGCTGAAAGGGCCCTTTTCCTATGGAACAATGACCATATTCTCAACTTGATTGCGCATAACCGTCAGGTGATCCTGCCCATTGTATTTCCCGCATTGGAGAAAAACTCTCAGAGCCACTGGAACCAGGCAGTGTTCAACTTGACTCTTAATATTAGAAAGATGTTCATAGAGATGGATGAGAAGCTCTTTCTGTCATGCCATTCTCACTTTAAAGAGGAAGAAGCTTTTCTAAGCTCGGTTGCTGAGAAGCGAAAAGAAGCATGGGAACGACTAGAGCGTGCAGCCAGTCTCCAGCCTATGATTGGGAATACGGCTGTTTTGGTGTCTCCTTTAATAACCTGA 1524 0.4462 MLKQFLSKLPRKSSKSDGVESFRDDSSRSGSSVHASPRVTGRANRSNGGSVSTRSNAVKRTSSSAVFPASIVSGIEPLVPFKDVPNAEKMNLFVSKLSLCCVTFDFTDPGKNIGEKDVKRQTLLELVDFVASGSMKFSEPAVLAMSRMCAINLFRVFPPQCRSIGGVAGGENDDDEPVFDPAWPHLQIVYELLLKFITSPCLDAKVAKKYIDHSFISRLLELFDSEDPRERDCLKTILHRVYGKFMVYRPYIRKSINNLFYRFVFESEKHYGVAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSMGVYFQQLSYCVTQFVEKEPKLASTVIRGLLKYWPITNSRKEVMFLGEVEEILEVINMVEFQRVMVPLFWRIGCCINSLHFQVAERALFLWNNDHILNLIAHNRQVILPIVFPALEKNSQSHWNQAVFNLTLNIRKMFIEMDEKLFLSCHSHFKEEEAFLSSVAEKRKEAWERLERAASLQPMIGNTAVLVSPLIT 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0609 507 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dere04g0609 507 MobiDBLite consensus disorder prediction 25 57 - -
Dere04g0609 507 Gene3D - 85 488 IPR011989 -
Dere04g0609 507 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 85 488 - -
Dere04g0609 507 SUPERFAMILY ARM repeat 91 484 IPR016024 -
Dere04g0609 507 PIRSF PP2A_B56 6 503 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dere04g0609 507 MobiDBLite consensus disorder prediction 1 57 - -
Dere04g0609 507 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 80 489 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0609 Dere-ChrDere04 6066853 6069481 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2114 05 31236087 31238732 Dere04g0609 04 6066853 6069481 CCT
Dere04g0609 04 6066853 6069481 Dere04g0609 04 6066853 6069481 ECH