Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2085 ATGGAAGGCGAGAAACTCAGTAGGCTTCTTCTTGCTCCTTTATTCTTCAGTTTACTGTTAGTGGGTTTAACTAGTGGGATTGGTGTAAATTGGGGGACACAGTCAACACACCCATTGGGAGCCTCCACGGTGGTGAAAATGCTAAAAGACAATGGGATTCAGAAGGTTAAGCTATTCGATGCCGATCCAAATATTCTAGATGCTCTGAAGAAGTCTGGGATTCAAGTGATGGTGGGTATTCCAAATGACATGCTCTATACACTGGCTAACAATATGCAAGCTGCTGAAAAATGGGTTTCCAAAAATGTTTCCACCCACATCTCTTCTAGTGGTGGAGTAGACATCAGGTACGTTGCTGTGGGGAATGAACCTTTCTTGTCAACTTACAATGGCAGCTTTGAAGCCACAACTCTTCCAGCTCTTCAAAACATCCAGGCAGCTCTCACAAAAGCCAAATTGAACAATCGAGTTAAAGTCACTGTTCCTCTAAACGCTGACGTGTATCTGAGTTCATCTGACAAGCCTTCTGATGGTGATTTCAGGCCAGACATCCACAATCTCATGCTGCAGATTGTCAAGTTCTTGAGCGACAATGGAGCTCCATTCACTGTCAATATCTACCCATTCATCAGTCTCTACTCGGACTCCAATTTCCCGCTCGACTATGCCTTCTTTGATGGTTATCAGACTCCTATAAACGACAATGGCAAGGTCTACGACAATGTCTTTGATGCCAACCACGACACACTTATCTGGGCATTGCAGAAGAATGGCTTCGCAAACTTGCCTATCATTATTGGAGAAATTGGGTGGCCCACTGATGGAGACCAACACGCAAATCTTCAGTACGCCCAGCGTTTCAACCAAGGCTTCATGTCTCGCTACCTCACGGGAAAAGGGACTCCAATGAGGCCTGGCCCTTTAGATGCATACTTGTTTAGCCTCATAGATGAAGATAACAAGAGCATTCAGCCAGGTAACTTTGAACGCCATTGGGGGTTGTTTTACTTTGATGGACAACCCAAGTACCAGCTTAATCTTGGGACAACGAGAACAAATTTAGTGGGTGCAAGTGGGGTCCATCATCTGGCCAAAAAGTGGTGTGTTTTGAAACCATCGGCGAATCTTAATGATGATCAAATGGCTCCAAGTGTGGCTTATGCTTGTCAAAATGCAGATTGTACAAGTCTTGGGTATGGGACTTCATGTGGGAATTTAGATGCTAGGGGTAATATTTCGTATGCTTTCAACAGCTACTTCCAAGTGAATGATCAGATTGATGGCGCATGCAAGTTCCCGGGTCTTTCTGTTGTCACTGACAAAGATCCTTCCGTTGGAGATTGCAGGTTCCGGACCATGATCGAGACAGATTCTGCTGGGACACTTGGATCCCTTAGAGTAGTGCTTTTTGTATTTTTTATTTTCACTCTTCTGTAA 1437 0.4447 MEGEKLSRLLLAPLFFSLLLVGLTSGIGVNWGTQSTHPLGASTVVKMLKDNGIQKVKLFDADPNILDALKKSGIQVMVGIPNDMLYTLANNMQAAEKWVSKNVSTHISSSGGVDIRYVAVGNEPFLSTYNGSFEATTLPALQNIQAALTKAKLNNRVKVTVPLNADVYLSSSDKPSDGDFRPDIHNLMLQIVKFLSDNGAPFTVNIYPFISLYSDSNFPLDYAFFDGYQTPINDNGKVYDNVFDANHDTLIWALQKNGFANLPIIIGEIGWPTDGDQHANLQYAQRFNQGFMSRYLTGKGTPMRPGPLDAYLFSLIDEDNKSIQPGNFERHWGLFYFDGQPKYQLNLGTTRTNLVGASGVHHLAKKWCVLKPSANLNDDQMAPSVAYACQNADCTSLGYGTSCGNLDARGNISYAFNSYFQVNDQIDGACKFPGLSVVTDKDPSVGDCRFRTMIETDSAGTLGSLRVVLFVFFIFTLL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2085 478 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Dere05g2085 478 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 439 IPR044965 GO:0004553|GO:0005975
Dere05g2085 478 FunFam Glucan endo-1,3-beta-glucosidase 8 362 459 - -
Dere05g2085 478 Pfam X8 domain 366 435 IPR012946 -
Dere05g2085 478 Gene3D Glycosidases 26 354 - -
Dere05g2085 478 Pfam Glycosyl hydrolases family 17 27 346 IPR000490 GO:0004553|GO:0005975
Dere05g2085 478 Gene3D - 363 458 - -
Dere05g2085 478 SMART X8_cls 366 450 IPR012946 -
Dere05g2085 478 FunFam Glucan endo-1,3-beta-glucosidase 5 26 353 - -
Dere05g2085 478 SUPERFAMILY (Trans)glycosidases 27 346 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2085 Dere-ChrDere05 30959343 30962816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g2085 14 465 Glycoside Hydrolase AT4G31140 68.142 0.0 667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0639 04 6372357 6375519 Dere05g2085 05 30959343 30962816 CCT