Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0639 ATGTATGTGGCTTTAGGCTGTAGCGGTTTGCGAGGGGCATCCCAAGACTATGTTGTGAAGGAAGAAGTTCCAGTATACATTGAGATCTCTCATGGTGTAACTTCTTCATTTGTTAGGCTATTATCTATAGATGTTTTCGTCTGGCTTCTCTTATATGAAGTATATTTCGGTGAAGAGTATAAGGAGATGATTGGAGGAGTGAAATTTAGTGGGGTTCTTGTCCCTTTGTTGTTTAGTGCGGTGTTGGTGGGTACAGTGAGTGGAATTGGTGTGAATTGGGGGACACAGTCAACACACCCTTTGCCACCATCAACGGTGGTGAAAATGCTAAAAGACAATGGGATTCAGAAGGTGAAGCTATTTGACGCAGACTCAAATATTCTGGATGCTCTGAAGAAGTCAGGGATACAGGTAATGGTGGGTATTCCAAATGACATGCTTTATTCAATGGCCAATAGTGTACAAGCTGCTGAAAAATGGGTTTCCAAGAACGTTTCAGCTCACGTCTCTTCTGGTGGAGTGGACATCAGGTATGTTGCAGTGGGGAATGAACCGTTCTTGTCAACATATAATGGCACCTTTGAATCCACAACTCTTCCGGCTCTTCAAAACATCCAATCAGCTCTCATCAAATCTGGTTTGGCCAATCAAGTCAAAGTCACCGTCCCTCTAAATGCTGACGTATATCAAAGTTCATCCGACAAGCCTTCCGATGGGGACTTCCGGCCAGACATCCATGACCTCATGTTGCAGATTGTCAAGTTCTTGAGTGACAATGGAGCCCCATTTACAGTCAACATCTATCCATTCATCAGCCTCTACAAAGATTCAAACTTTCCAGTTGACTATGCTTTCTTCAACGGCTATCAGACTCCCATAAATGACAATGGCAAGATCTACGACAATGTGTTAGATGCCAACTATGACTCCCTTGCATGGGCATTACAGAAAAATGGATTTGGAAACTTACCTATAATTGTGGGAGAAATTGGGTGGCCTACGGATGGAGACAGAAATGCAAATCTTCAGTACGCACAGCGTTTCAACCAAGGCTTCATGTCTCGCTATATTGCAGGAAAAGGGACTCCAATGAGGCCCGGTCCTATAGATGCCTACTTGTTTAGTCTCATAGATGAAGATAATAAGAGCATTCAGCCAGGTAATTTTGAACGCCATTGGGGGTTATTTTACTTTGATGGTCAACCTAAATACCAGCTTAATCTTGGGTCGTCAAGAAATGGATTAGTGGGTGCCAGTGGTGTGCATTATCTGGCCAAGAAGTGGTGTGTTTTGAAGCCTTCAGCGAACCTTAATGATGATCAAGTGGCACCAAGTGTGGCTTATGCTTGTGAGAAAGCAGATTGCACTAGTCTTGGATATGGGACTTCATGTGGGAATTTAGATACAAGGGGTAATATCTCTTATGCATTTAACAGCTACTACCAGGTAAATGACCAGCTTGATAGTGCTTGCAAATTCCCAGGCCTTTCGGTCATCACTAATCAAGATCCTTCAGTTGGAGATTGCAAATTCAGAATCATGATCCAGACAGATTCTGCTAACCCAGAAGGCAGAGTTGGTTCGTACACGATAGTGCTGTTTTTATTTTTGTTTTTTACTATCCTGTGA 1629 0.4291 MYVALGCSGLRGASQDYVVKEEVPVYIEISHGVTSSFVRLLSIDVFVWLLLYEVYFGEEYKEMIGGVKFSGVLVPLLFSAVLVGTVSGIGVNWGTQSTHPLPPSTVVKMLKDNGIQKVKLFDADSNILDALKKSGIQVMVGIPNDMLYSMANSVQAAEKWVSKNVSAHVSSGGVDIRYVAVGNEPFLSTYNGTFESTTLPALQNIQSALIKSGLANQVKVTVPLNADVYQSSSDKPSDGDFRPDIHDLMLQIVKFLSDNGAPFTVNIYPFISLYKDSNFPVDYAFFNGYQTPINDNGKIYDNVLDANYDSLAWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFMSRYIAGKGTPMRPGPIDAYLFSLIDEDNKSIQPGNFERHWGLFYFDGQPKYQLNLGSSRNGLVGASGVHYLAKKWCVLKPSANLNDDQVAPSVAYACEKADCTSLGYGTSCGNLDTRGNISYAFNSYYQVNDQLDSACKFPGLSVITNQDPSVGDCKFRIMIQTDSANPEGRVGSYTIVLFLFLFFTIL 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0639 542 ProSitePatterns Glycosyl hydrolases family 17 signature. 323 336 IPR000490 GO:0004553|GO:0005975
Dere04g0639 542 FunFam Glucan endo-1,3-beta-glucosidase 8 423 520 - -
Dere04g0639 542 FunFam Glucan endo-1,3-beta-glucosidase 5 88 414 - -
Dere04g0639 542 Gene3D Glycosidases 88 414 - -
Dere04g0639 542 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 78 500 IPR044965 GO:0004553|GO:0005975
Dere04g0639 542 SMART X8_cls 427 511 IPR012946 -
Dere04g0639 542 Pfam X8 domain 427 496 IPR012946 -
Dere04g0639 542 Gene3D - 423 521 - -
Dere04g0639 542 Pfam Glycosyl hydrolases family 17 89 407 IPR000490 GO:0004553|GO:0005975
Dere04g0639 542 SUPERFAMILY (Trans)glycosidases 89 407 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0639 Dere-ChrDere04 6372357 6375519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0639 73 541 Glycoside Hydrolase AT4G31140 72.281 0.0 724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0639 04 6372357 6375519 Dere05g2085 05 30959343 30962816 CCT