Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g2077 ATGTTGCGCACCATAATAACCGGGGAGCTGAATCCCAAGGGAGTTGGCAATGATCCCAGAGAAGACCGTTATTTCAGCATACCTAAACAAGCACAGACATATGATCCAGAAGGTGAATATGTTGCATACTGGTTGCCACAGAAGAGATCGATCCCCGGAGGACTGAATTCTCGAAGCATCTCGGATCGACTTTCTTCCTCGAGGGTTATTCATTTCTTCATTCTTTCTCAGGAAATAAAAGGAATGGCTAATGACAAAGGAGTTGGGGAAGGTGAAAACAAAGAGACAAGTCCTACTGCAACTGCCAATGGAAAGAAGAAACGCAAGGGATTTATTTCCCGAATTTGGAATGGAATATTTAGATTGCACGGAGATGATTTTGAGAAGAGATTGCAATACATTTCTAAAGAAGAAGCTGCTGTTCTGACAAGAATGAGCAGGAGATCTCAATCTTGGAGGCGAACAACCCGGCATCTTATTATAATTTCGATTATATTAGAGGTCATTGCTGTAGGTTATGCTATTATGACAACAAGATCAATAGAGATGAATTGGAAGATGAGGGCATTTCGAGTGTTGCCAATGTTTCTTTTGCCTGTTTTATCATCTGCTGCTTATTCAACAGTTGTCAGCTTCACAAGGATGTGTGATCGCAGGGACCAGAAAATTCTTGAAAAGCTTCGAGCTGAAAGGCAAGCAAAAATTGACGAGCTCAAAGAGAAGACAAATTATTATACTACTCAACAGCTCATTCAGAGATATGACCCAGACCCAGCAGCAAAGGCAGCGGCTGCTACTGTTTTGGCATCTAAGTTAGGTGCAGATTCAGGCTTGAAAGTTTATTTGGGGGATGAATCAAACCTTGGTGCTTCAACAGGGAAGAGTAATGATGTTGAACTTGTGCAAGCTAGTGGACTTCGAAATCGAAAACAAATGCAGTCTAGATCTACTAATCCTGGGATAACTATGCCAAACCATCCTGATGAGCAGTTTGTTGCAACTGGGGCAACTGATGAAACTCAGGCTTCTGAGCATAAACAGCTTGTAGTTGTTGAACACCACCAACCTCAAAGTTCATCCACGAATGATGGAGGATGGATTGCCCGAATTGCAGCATTGCTTGTGGGTGAGGATCCAACGCAGTCTTATGCACTCATATGTGGTAACTGCCATATGCATAATGGTCTGGCTCGGAAGGAGGATTTTCCTTATATTACGTACTATTGCCCGCACTGTAACGCCCTGAACAAGCCGAGACAATTGGATGGGGGTGTCTCTGGTTTAAATTCTCCAAACATGTGTTTTCAAAACAAAGAAGTTGCTAATGAAGTTAAAAATGCTTTGGCTTCTGCTGGTGACAGCTTAATCACAAGCAATAGTCCCGTTAATTCCGGTCCTGAGATTGAGGAAGTATCTGAAAGGGAAAATTTGGGAGAGAACTAG 1443 0.4248 MLRTIITGELNPKGVGNDPREDRYFSIPKQAQTYDPEGEYVAYWLPQKRSIPGGLNSRSISDRLSSSRVIHFFILSQEIKGMANDKGVGEGENKETSPTATANGKKKRKGFISRIWNGIFRLHGDDFEKRLQYISKEEAAVLTRMSRRSQSWRRTTRHLIIISIILEVIAVGYAIMTTRSIEMNWKMRAFRVLPMFLLPVLSSAAYSTVVSFTRMCDRRDQKILEKLRAERQAKIDELKEKTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLKVYLGDESNLGASTGKSNDVELVQASGLRNRKQMQSRSTNPGITMPNHPDEQFVATGATDETQASEHKQLVVVEHHQPQSSSTNDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNKPRQLDGGVSGLNSPNMCFQNKEVANEVKNALASAGDSLITSNSPVNSGPEIEEVSERENLGEN 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g2077 480 MobiDBLite consensus disorder prediction 307 326 - -
Dere05g2077 480 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 366 416 IPR019273 -
Dere05g2077 480 MobiDBLite consensus disorder prediction 455 480 - -
Dere05g2077 480 Coils Coil 221 244 - -
Dere05g2077 480 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 10 64 - -
Dere05g2077 480 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 105 467 IPR040115 GO:0071786
Dere05g2077 480 MobiDBLite consensus disorder prediction 307 324 - -
Dere05g2077 480 MobiDBLite consensus disorder prediction 84 104 - -
Dere05g2077 480 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 14 53 IPR036134 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g2077 Dere-ChrDere05 30881855 30887817 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2077 05 30881855 30887817 Dere04g0643 04 6406945 6410168 CCT