Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0643 ATGGCCGATGACAAAGGAGTCGGAGAAGGTGAAAAGAAAAATACTAGTTATACTGCCACAGGGAATGTAAAGAAGCGCAAGGGATTTTTTTCCAGAATTTGGAATGGGATATTTAGATTACATGGGGATGATCTTGAAAAGAGACTACAATACATTTCTAAAAAAGAAGCTGCTGTTCTGGCTAGAATGAATAGGAGATCCCAATCCTGGAGGCGAGCAACCCGGCATCTTATTGTATTTTCTGTTATATTTGAGGTTATTGCTGTAGGTTATGCTATAATGACAGCAAGATCAATGGATATAAATTGGAAGATGAGGGCAATTCGGGTGTTGCCAGTGTTTCTTTTGCCTGCCTTATCATCTGCCGCCTATTCAGCATTTATCAGCTTCACAAGGATGTGTGATCGAAGGGACCAGAAAATTCTTGAAAGACTTCGAGCTGAAAGGCAAGAAAAAATTGATGAGCTGAAAGAGAAGACAAACTATTACATGACTCAACAGCTCATTCAGAAATATGACCCAGATCCAGCAGCGAAGGCAGCAGCTGCTACTGTTTTGGCATCAAAGTTGGGTGCAGATTCAGGCATGAAAGTGTATGTTGGAGATGAATCTAAGCATACCTGTCCCACAGGGAAGAACAGTGATCTTGAACTTGTGGAATCCAGTGGACTTCGAAGTCGCAAACAAGTGGTTTCTAAATCCACTAGTCCAGGAGCAACTGCACCTACACATTCTGATCAACAATTTGTTGGTTCTAAAAGAATTGATCAATGTCAGATTTCTGAGCATAATCAGCTTGTAGTTGTCGAACATGACCAACCTCAAAGTTTAACCACCAATGACGCAGGATGGATTGCTCGAATTGCAACATTGCTTGTGGGTGAGGATCCAAGGCAGTCTTATGCGCTTATATGTGGCAACTGCCATATGCATAATGGTCTTGCTCAGAAGGAGGATTTCCCATATATCACTTACTATTGCCCGCACTGTCACGCCTTGAACAAACCAAAGCAATTGGATGAGCGCATCTCTGTTTCTAGTTCACAAAACATGGGGTGTTCAAAAACAAACGTTATTGAGGCAGTTCAAAATGCTAGCGCTTCTGCAAGTGACAGCACAATTACAAATAACAGTTCTGTAAATGCTAGCCTTGAGATGGAGGAGGAATCCAAAAAGGCAAGTTTGGAGGAGAAAGTTAGTTGA 1203 0.4173 MADDKGVGEGEKKNTSYTATGNVKKRKGFFSRIWNGIFRLHGDDLEKRLQYISKKEAAVLARMNRRSQSWRRATRHLIVFSVIFEVIAVGYAIMTARSMDINWKMRAIRVLPVFLLPALSSAAYSAFISFTRMCDRRDQKILERLRAERQEKIDELKEKTNYYMTQQLIQKYDPDPAAKAAAATVLASKLGADSGMKVYVGDESKHTCPTGKNSDLELVESSGLRSRKQVVSKSTSPGATAPTHSDQQFVGSKRIDQCQISEHNQLVVVEHDQPQSLTTNDAGWIARIATLLVGEDPRQSYALICGNCHMHNGLAQKEDFPYITYYCPHCHALNKPKQLDERISVSSSQNMGCSKTNVIEAVQNASASASDSTITNNSSVNASLEMEEESKKASLEEKVS 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0643 400 MobiDBLite consensus disorder prediction 365 384 - -
Dere04g0643 400 MobiDBLite consensus disorder prediction 365 400 - -
Dere04g0643 400 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 24 391 IPR040115 GO:0071786
Dere04g0643 400 MobiDBLite consensus disorder prediction 385 400 - -
Dere04g0643 400 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 284 334 IPR019273 -
Dere04g0643 400 Coils Coil 139 162 - -
Dere04g0643 400 MobiDBLite consensus disorder prediction 222 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0643 Dere-ChrDere04 6406945 6410168 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g2077 05 30881855 30887817 Dere04g0643 04 6406945 6410168 CCT