Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1969 ATGTCTCTGAGAACATCCGATTCGTCGGAGAGTCTGATACTGCCGGTGTCGGATACCCCAAAGGACCAAAATGGAAAGGTGCTTTTCAAGGTTGATGATAAGCTCTTTAAAGGTTCTGCCATGACCAAACGAGGAGCCTACGCTGCTGTCTCTTACATGTCATGCGCAGTGCTCCTGGTGATGTTCAATAAGGCGGCTCTTTCGTCTTACAACTTCCCATCTGCAAATGTCATCACATTTCTTCAGATGGTTTGTTCTTATCTTTTTCTGTATGTATTGAGGCACTGGAAGATAATCTCTTTCACAGCAGGTGAATCTTTGATTTTATCTGACAACTCAACAAAATTTGTATCACTGAAGACTTTGAGGCACACGCTGCCTCTGTCAGGAACATATTTACTTTACATGCTAGTCACTGTGGAGTCTGTTCGTGGAGTAAATGTTCCAATGTACACCGCCATTAGGAGGACGACAGTGGTATTTACAATGCTTTTTGAGTATATTCTGGTAGGGCAGAGATATACATCCTCTATTATTTTCAGTGTTGGCTTGATTGCCTTTGGTGCATTTGTTGCGGGAGTGCGGGACTTATCATTTGATGCTTATGGCTATGCGATTGTTTTCATGGCGAACATCACCACAGCAATATATCTCGCGACCATAGCCCGTGTTGGAAAAACCAGTGGACTTAATAGCTTTGGCCTCATGTGGTGCAACAGTATCATATGTGGACCAGTTTTGCTGATTTGGACAATAATTCAGGGTGACTTGAAGATGACAATCAATTTTCCTTATCTTTTTTCTCCAGGCTTTATAGTTGTTTTGCTTTTTTCCTGCATACTGGCTTTCTTCTTGAATTACAGTATTTTTCTGAACACAACTCTAAATTCAGCTCTCACTCAGACGATTTGTGGTAGTCTGAAGGATCTATTTACTATTGGCCTCGGCTGGATGCTGTTTGGTGGGCTACCATTTGATATCTGGAATGTAATTGGGCAACTTCTTGGTTTTGCTGGCTCTGGTTTATATGCTTACTATAAGCTTGTTGGCAAATAA 1056 0.4167 MSLRTSDSSESLILPVSDTPKDQNGKVLFKVDDKLFKGSAMTKRGAYAAVSYMSCAVLLVMFNKAALSSYNFPSANVITFLQMVCSYLFLYVLRHWKIISFTAGESLILSDNSTKFVSLKTLRHTLPLSGTYLLYMLVTVESVRGVNVPMYTAIRRTTVVFTMLFEYILVGQRYTSSIIFSVGLIAFGAFVAGVRDLSFDAYGYAIVFMANITTAIYLATIARVGKTSGLNSFGLMWCNSIICGPVLLIWTIIQGDLKMTINFPYLFSPGFIVVLLFSCILAFFLNYSIFLNTTLNSALTQTICGSLKDLFTIGLGWMLFGGLPFDIWNVIGQLLGFAGSGLYAYYKLVGK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1969 351 PANTHER SOLUTE CARRIER FAMILY 35 47 347 - -
Dere05g1969 351 Pfam Triose-phosphate Transporter family 55 343 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1969 Dere-ChrDere05 29592338 29597220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1969 23 288 Organic Solute Cotransporters AT2G13650 23.636 1.40e-10 59.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1969 05 29592338 29597220 Dere04g0550 04 5513535 5519044 CCT
Dere05g1969 05 29592338 29597220 Dere05g1969 05 29592338 29597220 ECH